Miyakogusa Predicted Gene

Lj0g3v0327169.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0327169.1 tr|A9U113|A9U113_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173097,48.96,0.000000000000002,seg,NULL,CUFF.22257.1
         (564 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62409 similar to UniRef100_A7QSL4 Cluster: Chromosome...   825   0.0  
gnl|LJGI|AV770156 homologue to UniRef100_A7QSL4 Cluster: Chromos...   202   2e-51

>gnl|LJGI|TC62409 similar to UniRef100_A7QSL4 Cluster: Chromosome undetermined
           scaffold_161, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_161,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (88%)
          Length = 1134

 Score =  825 bits (416), Expect = 0.0
 Identities = 527/564 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgtttatgaaaggagatttgctttctcgaaccaggaagcttgtgaagggtttggcc 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 225 atgtcgtttatgaaaggagatttgctttctcgaaccagaaagcttgtgaagggtttggcc 284

                                                                       
Query: 61  aaggcagaacctgtgtggctcaaagcaatggaacaagcaccacctgcaacatttcctcga 120
           ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 285 aaggcagaacccgtgtggctcaaagccatggaacaagcgccacctgcaacatttcctcga 344

                                                                       
Query: 121 gctggggaaaaagttcagaccatcactcttcctgaggatgtttatgtgaaaaagttttat 180
           |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 345 gctggggataaaattcagaccatcactcttcctgaggatgtttatgtgaaaaagttctat 404

                                                                       
Query: 181 aaaaaatacccagaatctaagtaccatgatcccatcaggttctgtgcttttgatccccct 240
           ||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 405 aaaaaataccctgaatctaagtaccatgatccgatcaagttctgtgcttttgatccccct 464

                                                                       
Query: 241 ccatctcgtatatttgccttgagggttcttgagttgaaaaagcatggcattggcgaggaa 300
           ||||||||| | ||||||||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 465 ccatctcgtctgtttgccttgagggttcttgagttgaaagagcatggcattagtgaggaa 524

                                                                       
Query: 301 caagctatggctgtagccgatacggaatatcgagcagagaaaaaggcgaagaagcaagca 360
           ||||| ||| |||||||||||||||||||||| || ||||| |||||||||||||| |||
Sbjct: 525 caagcaatgtctgtagccgatacggaatatcgggctgagaagaaggcgaagaagcaggca 584

                                                                       
Query: 361 tatagtcgtttgaagcaaatcgctcgtcttcaaggaaagagacctcctccaaacccatat 420
           ||||  ||| ||||| |||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 585 tataaacgtctgaaggaaattgctcatcttcaaggaaagagacctcctccaaacccatat 644

                                                                       
Query: 421 cctaatcctatcaaggagatacaagccgaggagaggaaatacgtccgtgatcgtttcttc 480
           |||||||||||||||||||||||||| |||||||||||||| || || ||||||||||| 
Sbjct: 645 cctaatcctatcaaggagatacaagctgaggagaggaaatatgttcgcgatcgtttcttt 704

                                                                       
Query: 481 aatcccaagatactcgaagttgtgaagcaaaagaaagcagaggctgagagtttcagtagt 540
           |||||||||||||  ||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 705 aatcccaagatacatgaaattgtgaagcaaaagaaagcagaggctgagagtttcagaagt 764

                                   
Query: 541 ggatttagagggggtgattggtga 564
           ||||| ||||||||||||||||||
Sbjct: 765 ggattcagagggggtgattggtga 788


>gnl|LJGI|AV770156 homologue to UniRef100_A7QSL4 Cluster: Chromosome undetermined
           scaffold_161, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_161,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (13%)
          Length = 554

 Score =  202 bits (102), Expect = 2e-51
 Identities = 135/146 (92%)
 Strand = Plus / Minus

                                                                       
Query: 419 atcctaatcctatcaaggagatacaagccgaggagaggaaatacgtccgtgatcgtttct 478
           |||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||
Sbjct: 554 atcctaatcctatcaaggagatacaagctgaggagaggaaatatgttcgcgatcgtttct 495

                                                                       
Query: 479 tcaatcccaagatactcgaagttgtgaagcaaaagaaagcagaggctgagagtttcagta 538
           | |||||||||||||  ||| |||||||||||||| |||||||||||||||||||||| |
Sbjct: 494 ttaatcccaagatacatgaaattgtgaagcaaaagcaagcagaggctgagagtttcagaa 435

                                     
Query: 539 gtggatttagagggggtgattggtga 564
           ||||||| ||||||||||||||||||
Sbjct: 434 gtggattcagagggggtgattggtga 409