Miyakogusa Predicted Gene
- Lj0g3v0327119.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0327119.2 Non Chatacterized Hit- tr|K3YRR4|K3YRR4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016777,48.48,1.3,seg,NULL,CUFF.22252.2
(360 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68161 weakly similar to UniRef100_A7PGP7 Cluster: Chr... 234 3e-61
gnl|LJGI|FS336200 weakly similar to UniRef100_A7PAM4 Cluster: Ch... 212 1e-54
gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chr... 62 2e-09
>gnl|LJGI|TC68161 weakly similar to UniRef100_A7PGP7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 808
Score = 234 bits (118), Expect = 3e-61
Identities = 184/208 (88%), Gaps = 11/208 (5%)
Strand = Plus / Plus
Query: 80 gttgctgctgctataaagccaccaccagcattcatttcttcaaaccaactcattcgtttc 139
|||||||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||
Sbjct: 129 gttgctgctgttataaagtcaccaccagcattcatttgttcaaaccaagtcattcgtttc 188
Query: 140 gcgattcttctcttgctctt-----------tcattaaccatgtctgctcttccgcctgt 188
||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 189 gcgatacttctcttgctcttgtcttgttctctcattaaccatgtctgctcttccgccagt 248
Query: 189 caacaccgccgccaacaactctggtggtgggattccagctgtgggaaataggatcgatga 248
|||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||
Sbjct: 249 caacaccgccgccaacaattttggtggggggattccagttgtgggaaataggatcgatga 308
Query: 249 tcaggaaaagggaaaaacatgccaccaa 276
||||| ||| |||||||||||||||||
Sbjct: 309 tcaggcaaatagaaaaacatgccaccaa 336
>gnl|LJGI|FS336200 weakly similar to UniRef100_A7PAM4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 714
Score = 212 bits (107), Expect = 1e-54
Identities = 183/211 (86%), Gaps = 23/211 (10%)
Strand = Plus / Plus
Query: 80 gttgctgctgctataaagccaccaccagcattcatttcttcaaaccaactcattcgtttc 139
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 35 gttgctgctgctataaagccaccaccagcattcatttcttcaaaccaagtcattcgtttc 94
Query: 140 gcgattcttctcttgctctt-----------tcattaaccatgtctgctcttccgcctgt 188
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 95 gcgattcttctcttgctcttgtcttgttctctcattaaccatgtctgctcttccgcctgt 154
Query: 189 caacacc---gccgccaacaactctggtggtgggattccagctgtgggaaataggatcga 245
||||||| |||||||||||||||| ||| |||||||||| ||||| ||||
Sbjct: 155 caacaccgctgccgccaacaactctgctggggggattccagttgtgg---------tcga 205
Query: 246 tgatcaggaaaagggaaaaacatgccaccaa 276
|||||||| ||||||||||||||||||||||
Sbjct: 206 tgatcagggaaagggaaaaacatgccaccaa 236
>gnl|LJGI|TC74411 weakly similar to UniRef100_A7PAM4 Cluster: Chromosome chr14
scaffold_9, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 492
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 atggaccaacgttttgttcttatcggcgagt 31
|||||||||||||||||||||||||||||||
Sbjct: 139 atggaccaacgttttgttcttatcggcgagt 169