Miyakogusa Predicted Gene
- Lj0g3v0327029.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0327029.1 Non Chatacterized Hit- tr|A3BER1|A3BER1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,43.75,0.0000000001,ADP-ribosylation,NULL; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; ZINC_FINGER_C2H2_1,CUFF.22245.1
(1284 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC597461 similar to UniRef100_A7P110 Cluster: Chromosom... 1146 0.0
gnl|LJGI|TC64196 similar to UniRef100_A7P110 Cluster: Chromosome... 569 e-161
gnl|LJGI|TC66136 similar to UniRef100_A7P110 Cluster: Chromosome... 262 5e-69
gnl|LJGI|AV776033 similar to UniRef100_A7R270 Cluster: Chromosom... 260 2e-68
gnl|LJGI|TC67972 similar to UniRef100_A7P110 Cluster: Chromosome... 224 1e-57
>gnl|LJGI|DC597461 similar to UniRef100_A7P110 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 578
Score = 1146 bits (578), Expect = 0.0
Identities = 578/578 (100%)
Strand = Plus / Plus
Query: 511 cttcattcaagcaataggtttcaccctgagacaacaacagactctaatggctcttcttct 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttcattcaagcaataggtttcaccctgagacaacaacagactctaatggctcttcttct 60
Query: 571 gtgacttgccacaaatgtggagagcaatttaacaaatgggaagctgctgaagctcatcat 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgacttgccacaaatgtggagagcaatttaacaaatgggaagctgctgaagctcatcat 120
Query: 631 ctgtccaaacatgcagttactgagcttgtggaaggagattcatcaaggaaaatagtggag 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgtccaaacatgcagttactgagcttgtggaaggagattcatcaaggaaaatagtggag 180
Query: 691 atcatatgcaggacaagttggttaaagtctgaaaacaactgcggtcgaatcgagagagtt 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcatatgcaggacaagttggttaaagtctgaaaacaactgcggtcgaatcgagagagtt 240
Query: 751 ttgaaagtccacaacatgcaaaggactttggctagatttgaagagtacagggagatggtg 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgaaagtccacaacatgcaaaggactttggctagatttgaagagtacagggagatggtg 300
Query: 811 aaaaccaaagccagcaaactccagaagaagcatcctaggtgtttggctgatggaaatgag 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaaccaaagccagcaaactccagaagaagcatcctaggtgtttggctgatggaaatgag 360
Query: 871 cttttgaggttctatggaaccactcttgcatgctctcttggtctcaatggttgttctagt 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttttgaggttctatggaaccactcttgcatgctctcttggtctcaatggttgttctagt 420
Query: 931 ctctgcctatcagataaatgctgtgtttgcagaattatcaggaatggcttttctgcaaag 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctctgcctatcagataaatgctgtgtttgcagaattatcaggaatggcttttctgcaaag 480
Query: 991 aaggagctcaagggtggggttggtgtttttacaacctccacaagtggaagagcttttgaa 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaggagctcaagggtggggttggtgtttttacaacctccacaagtggaagagcttttgaa 540
Query: 1051 accattgagagttttggtaatgaaccaccatcattgag 1088
||||||||||||||||||||||||||||||||||||||
Sbjct: 541 accattgagagttttggtaatgaaccaccatcattgag 578
>gnl|LJGI|TC64196 similar to UniRef100_A7P110 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 1015
Score = 569 bits (287), Expect = e-161
Identities = 528/607 (86%), Gaps = 6/607 (0%)
Strand = Plus / Plus
Query: 679 aaaatagtggagatcatatgcaggacaagttggttaaagtctgaaaacaactgcggtcga 738
|||||||||||||| ||||||||||| || |||||||||||||| ||| |||| ||||||
Sbjct: 1 aaaatagtggagataatatgcaggacgagctggttaaagtctgagaaccactgtggtcga 60
Query: 739 atcgagagagttttgaaagtccacaacatgcaaaggactttggctagatttgaagagtac 798
|| || ||||||||||||||||| |||||||| | ||| ||||||| ||||||||||||
Sbjct: 61 attgaaagagttttgaaagtccataacatgcagaagacactggctaggtttgaagagtac 120
Query: 799 agggagatggtgaaaaccaaagccagcaaactccagaagaagcatcctaggtgtttggct 858
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agagagatggtgaaaatcaaagccagcaaactccagaagaagcatcctaggtgtttggct 180
Query: 859 gatggaaatgagcttttgaggttctatggaaccactcttgcatgctctcttggtctcaat 918
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 gatgggaatgagcttttgaggttctatggcaccactcttgcatgctctcttggtctcaat 240
Query: 919 ggttgttctagtctctgcctatcagataaatgctgtgtttgcagaattatcaggaatggc 978
|||| ||| || || |||| || || | |||||||||||| ||||||||||| |||||
Sbjct: 241 ggttcttccagcctgtgccaatatgaaagatgctgtgtttgtagaattatcagaaatggg 300
Query: 979 ttttctgc---aaagaaggagctcaagggtggggttggtgtttttacaacctccacaagt 1035
|||||| | ||| |||||||||||||||| |||||||||| || || |||||||||
Sbjct: 301 ttttcttccaacaaggaggagctcaagggtggaattggtgttttcactacttccacaagt 360
Query: 1036 ggaagagcttttgaaaccattgagagttttggtaatgaaccaccatcattgagaaaagcc 1095
||||| ||||||||| | ||||||| ||| || |||| |||||| ||||||||||
Sbjct: 361 ggaagggcttttgaatctattgagattttaggccatga---cccatcactgagaaaagca 417
Query: 1096 cttattgtgtgcagagtgattgctggcagggttcataggccacttgagaacattcaggag 1155
| || || |||||||| |||||||||||||| ||||| || || || |||||||||||
Sbjct: 418 ttgatagtatgcagagtcattgctggcagggtccatagacctctggaaaacattcaggaa 477
Query: 1156 attgcatcccagacagggtttgactcattggctgggaaagtgggcctttattcaaatatt 1215
|| ||| |||||||||||||| ||||||||||| ||||| || || |||||||| |||
Sbjct: 478 atggcaggacagacagggtttgattcattggctggcaaagttggtctctattcaaacatt 537
Query: 1216 gaggagctttatttgctcaatcctagagctcttcttccttgctttgtggtgatttgtaaa 1275
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 538 gaggagctttatttgctcaatcctagagctcttcttccttgctttgtggtcgtttgcaaa 597
Query: 1276 ccatgaa 1282
|| ||||
Sbjct: 598 ccctgaa 604
>gnl|LJGI|TC66136 similar to UniRef100_A7P110 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 744
Score = 262 bits (132), Expect = 5e-69
Identities = 268/313 (85%), Gaps = 9/313 (2%)
Strand = Plus / Plus
Query: 1 atgccaacagtgtggttcaatctgaagaggtctttacattgcaaatcagaaccctctgaa 60
|||||||| ||||||||| |||||||||||| |||| ||||||||||| || | ||
Sbjct: 435 atgccaactgtgtggttctccctgaagaggtctctacactgcaaatcagagccaacagat 494
Query: 61 gttcatgacccaaaatcaaggaagcaattgagcacaatcttgaccaaaaaaccaggaaga 120
||||||| ||||| ||||||||||| ||| |||||||||||| |||| |||| | |
Sbjct: 495 gttcatgttccaaagtcaaggaagcatttggccacaatcttgactaaaagggcagggaca 554
Query: 121 ------tcagggtgttcaaggtccatagctaatctcaaagatgtcatccatggaagcaag 174
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 555 gggaggtcagggtgttcaaggtccatagcaaatctcaaagatgtcatccatggaagcaag 614
Query: 175 aggcatcttgaagacaagccaccaacttgcagcccaagatccataggaagcagtgagttt 234
|||||| | ||| |||||||||| ||||||||| || |||||||| |||||||||||
Sbjct: 615 aggcattt---agagaagccaccaagttgcagcccgaggtccatagggagcagtgagttc 671
Query: 235 ctcaacccaataactcatgaagtgattttgagtaactcaaggtgtgagctcaaaatcact 294
|||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 672 ctcaacccaataacccatgaagtcattttgagcaactcaaggtgtgagctgaaaatcact 731
Query: 295 ggatatggaggat 307
|| ||||||||||
Sbjct: 732 ggctatggaggat 744
>gnl|LJGI|AV776033 similar to UniRef100_A7R270 Cluster: Chromosome undetermined
scaffold_405, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_405, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(11%)
Length = 383
Score = 260 bits (131), Expect = 2e-68
Identities = 164/171 (95%), Gaps = 3/171 (1%)
Strand = Plus / Minus
Query: 1117 gctggcagggttcataggccacttgagaacattcaggagattgcatccc-agacagggtt 1175
||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 383 gctggcagggttcatagtccacttgagaacattcaggagattgcatccccagaccgggtt 324
Query: 1176 tgactcattggctgggaaagtgggcctttattcaaatattgaggagctttatttgctcaa 1235
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 323 tgactcattggctgggaaagtgggcctttattcaaatattgaggagcgttatttgctcag 264
Query: 1236 tcctagagctcttcttccttgct-ttgtggtgatttgtaaa-ccatgaacc 1284
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 263 tcctagagctcttcttccttgctcttgtggtgatttgtaaatccatgaacc 213
>gnl|LJGI|TC67972 similar to UniRef100_A7P110 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 828
Score = 224 bits (113), Expect = 1e-57
Identities = 243/286 (84%), Gaps = 9/286 (3%)
Strand = Plus / Plus
Query: 1 atgccaacagtgtggttcaatctgaagaggtctttacattgcaaatcagaaccctctgaa 60
|||||||| ||||||||| |||||||||||| |||| ||||||||||| || | ||
Sbjct: 546 atgccaactgtgtggttctccctgaagaggtctctacactgcaaatcagagccaacagat 605
Query: 61 gttcatgacccaaaatcaaggaagcaattgagcacaatcttgaccaaaaaaccaggaaga 120
||||||| ||||| ||||||||||| ||| |||||||||||| |||| |||| | |
Sbjct: 606 gttcatgttccaaagtcaaggaagcatttggccacaatcttgactaaaagggcagggaca 665
Query: 121 ------tcagggtgttcaaggtccatagctaatctcaaagatgtcatccatggaagcaag 174
||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 666 gggaggtcagggtgttcaaggtccatagcaaatctcaaagatgtcatccatggaagcaag 725
Query: 175 aggcatcttgaagacaagccaccaacttgcagcccaagatccataggaagcagtgagttt 234
|||||| | ||| |||||||||| ||||||||| || |||||||| |||||||||||
Sbjct: 726 aggcattt---agagaagccaccaagttgcagcccgaggtccatagggagcagtgagttc 782
Query: 235 ctcaacccaataactcatgaagtgattttgagtaactcaaggtgtg 280
|||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 783 ctcaacccaataacccatgaagtcattttgagcaactcaaggtgtg 828