Miyakogusa Predicted Gene
- Lj0g3v0326929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0326929.1 Non Chatacterized Hit- tr|G7LCW1|G7LCW1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,65.49,0,seg,NULL; UBIQUITIN_CONJUGAT_2,Ubiquitin-conjugating
enzyme, E2; no description,Ubiquitin-conjugatin,CUFF.22238.1
(2103 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS350619 similar to UniRef100_A7P1M3 Cluster: Chromosom... 993 0.0
gnl|LJGI|FS324198 833 0.0
gnl|LJGI|AW428706 698 0.0
gnl|LJGI|BP042910 weakly similar to UniRef100_A7P1M3 Cluster: Ch... 78 3e-13
gnl|LJGI|TC64634 weakly similar to UniRef100_UPI0000163111 Clust... 54 4e-06
>gnl|LJGI|FS350619 similar to UniRef100_A7P1M3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 706
Score = 993 bits (501), Expect = 0.0
Identities = 519/525 (98%)
Strand = Plus / Minus
Query: 1579 ggcagtaagaatgagaagtggcttccgggtgtttcaacaattttacaagttctagtctct 1638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ggcagtaagaatgagaagtggcttccgggtgtttcaacaattttacaagttctagtctct 647
Query: 1639 atacaaggtctaatcttgaatacaaagccttactttaatgagcctggatatgcacatatg 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atacaaggtctaatcttgaatacaaagccttactttaatgagcctggatatgcacatatg 587
Query: 1699 agtggctccgctgatggggaattgagatccccacgggataatgaggaaacattcatgctg 1758
|||||||| |||||||| ||||||||||||| |||| |||||||||| ||||||||||||
Sbjct: 586 agtggctcggctgatggtgaattgagatccctacggtataatgaggatacattcatgctg 527
Query: 1759 tctttgaagacaatgatgtatatgataagaaggcctccaaagaattttgaggacttcgtt 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tctttgaagacaatgatgtatatgataagaaggcctccaaagaattttgaggacttcgtt 467
Query: 1819 gttgggcacttctgcagccgagctcatgatattttggtggcatgtaaagcatacatggat 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gttgggcacttctgcagccgagctcatgatattttggtggcatgtaaagcatacatggat 407
Query: 1879 ggtgctcaagttggctgtttagtcaaaggtggggttcaggatgttgatcaaggagacaag 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggtgctcaagttggctgtttagtcaaaggtggggttcaggatgttgatcaaggagacaag 347
Query: 1939 agctgctcaaagcagtttcagtattgcttatctgcacttgttaacatgcttgttaaagag 1998
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggctgctcaaagcagtttcagtattgcttatctgcacttgttaacatgcttgttaaagag 287
Query: 1999 tttacacaaattggagttaaggactgtttgaagtttgtgtcttcatcaacagcacaggac 2058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tttacacaaattggagttaaggactgtttgaagtttgtgtcttcatcaacagcacaggac 227
Query: 2059 aagcagttgggtgaagtgcctgtggctgctatgttttcttgataa 2103
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 aagcagttgggtgaagtgcctgtggctgctatgttttcttgataa 182
>gnl|LJGI|FS324198
Length = 672
Score = 833 bits (420), Expect = 0.0
Identities = 420/420 (100%)
Strand = Plus / Plus
Query: 1 atgatgaaccctgatgtgatcgagattcctcaaccggcgtgtaacgcttcttccaatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atgatgaaccctgatgtgatcgagattcctcaaccggcgtgtaacgcttcttccaatttg 312
Query: 61 atgaagcagaaagaggctgtttttcatggcgtgattgacatcagcaatgatgatgactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atgaagcagaaagaggctgtttttcatggcgtgattgacatcagcaatgatgatgactct 372
Query: 121 gctgatttagtgttagttggtgaaaaagttggaaaaagtaacaaggggaagacagttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gctgatttagtgttagttggtgaaaaagttggaaaaagtaacaaggggaagacagttgaa 432
Query: 181 tctattcatgatggttttggtgatcatcaaaatatggaagtgtttgacagtatattttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctattcatgatggttttggtgatcatcaaaatatggaagtgtttgacagtatattttgt 492
Query: 241 ccacctgttatgggcaaatctggaccaggtagcggggttgagtcttccaatggttatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccacctgttatgggcaaatctggaccaggtagcggggttgagtcttccaatggttatact 552
Query: 301 tcaggatcacatgatataatccatgttgatgacatttgttctgatcaatcatatgatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcaggatcacatgatataatccatgttgatgacatttgttctgatcaatcatatgatgat 612
Query: 361 gatgacttctctgatcttttttctgatgattatatggacgtagatgattatgctatacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gatgacttctctgatcttttttctgatgattatatggacgtagatgattatgctatacta 672
>gnl|LJGI|AW428706
Length = 356
Score = 698 bits (352), Expect = 0.0
Identities = 355/356 (99%)
Strand = Plus / Plus
Query: 627 cggaaaggagctgtcttcttctaagttatcttctcaagctgcatctagtaagaagaaatt 686
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggaaagaagctgtcttcttctaagttatcttctcaagctgcatctagtaagaagaaatt 60
Query: 687 agatgcctcacaatgcaggaggcgtaagctaaagttggcattagaagtggagtcatctaa 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agatgcctcacaatgcaggaggcgtaagctaaagttggcattagaagtggagtcatctaa 120
Query: 747 atctaattgggttttgggacattatggtaaaaagaagcctgatgtttttggttcttcagc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctaattgggttttgggacattatggtaaaaagaagcctgatgtttttggttcttcagc 180
Query: 807 taaccatggatatatgaacaattcagaggccatgatgaagctgccatatggtgagccaca 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taaccatggatatatgaacaattcagaggccatgatgaagctgccatatggtgagccaca 240
Query: 867 atgggaactatttgaaagtgaaaagaaagctgctggaagtatcagttcacatcattcgaa 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgggaactatttgaaagtgaaaagaaagctgctggaagtatcagttcacatcattcgaa 300
Query: 927 ttctgttggacctgtagatggatcattgcatttaccgggaaatgagtctgcaaacc 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttctgttggacctgtagatggatcattgcatttaccgggaaatgagtctgcaaacc 356
>gnl|LJGI|BP042910 weakly similar to UniRef100_A7P1M3 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 401
Score = 77.8 bits (39), Expect = 3e-13
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 1856 tggcatgtaaagcatacatggatggtgctcaagttggctgtttagtcaaaggtggggttc 1915
|||| |||||| |||||||||| |||| ||||||||| ||| | |||||||||||| |||
Sbjct: 401 tggcgtgtaaaacatacatggaaggtgttcaagttggatgtgtggtcaaaggtgggtttc 342
Query: 1916 aggatgttgat 1926
|||||||||||
Sbjct: 341 aggatgttgat 331
>gnl|LJGI|TC64634 weakly similar to UniRef100_UPI0000163111 Cluster: UBC26
(ubiquitin-conjugating enzyme 25); ubiquitin-protein
ligase; n=1; Arabidopsis thaliana|Rep: UBC26
(ubiquitin-conjugating enzyme 25); ubiquitin-protein
ligase - Arabidopsis thaliana, partial (6%)
Length = 816
Score = 54.0 bits (27), Expect = 4e-06
Identities = 99/123 (80%)
Strand = Plus / Plus
Query: 1288 ccaaaggattgggctaaaagaatccaggaagagtggaagttattggagaagaacttacct 1347
|||||| ||||||| |||| |||||||||||||||||| | |||||| | || || ||
Sbjct: 671 ccaaagaattgggccaaaaaaatccaggaagagtggaaaatcttggaggaaaatttgcca 730
Query: 1348 gatacaatatttgtcagagtttatgaatcaagaatagatcttttgagggctgtgattatt 1407
|| || || ||||| ||||||| ||| || ||||| || ||| | |||||||| || |||
Sbjct: 731 gaaactatttttgtgagagtttgtgagtctagaatggaacttctaagggctgtcatcatt 790
Query: 1408 gga 1410
|||
Sbjct: 791 gga 793