Miyakogusa Predicted Gene
- Lj0g3v0326889.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0326889.1 tr|B9NKJ8|B9NKJ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_591069 PE=4 SV=1,60.53,0.00006,
,CUFF.22237.1
(436 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67867 similar to UniRef100_A7R4Q0 Cluster: Chromosome... 841 0.0
gnl|LJGI|TC65866 similar to UniRef100_A7R4Q0 Cluster: Chromosome... 62 3e-09
gnl|LJGI|TC63655 similar to UniRef100_A7R4Q0 Cluster: Chromosome... 62 3e-09
>gnl|LJGI|TC67867 similar to UniRef100_A7R4Q0 Cluster: Chromosome undetermined
scaffold_754, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_754, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(95%)
Length = 1595
Score = 841 bits (424), Expect = 0.0
Identities = 433/436 (99%)
Strand = Plus / Plus
Query: 1 atggtttcttctgtgtttacccttatctgctttcttcattctgcaatagctcttagttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atggtttcttctgtgtttacccttatctgctttcttcattctgcaatagctcttagttgc 715
Query: 61 ggagctatgatgatattctactccaaagagatcacagtgtttgggcgtggaccggagacc 120
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 716 ggagctatgatgatattctactccaaagagatcacagtgtttggccgtggaccggagact 775
Query: 121 gccagcaagcttcaaggttcaacgtcgcatgatcagctactgattaagacctctgattcg 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gcaagcaagcttcaaggttcaacgtcgcatgatcagctactgattaagacctctgattcg 835
Query: 181 ttctccggcctgctgttgttcgcaattgggatccttttggttatggtttccttggttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ttctccggcctgctgttgttcgcaattgggatccttttggttatggtttccttggttaag 895
Query: 241 gatagggattttcagagcttcttcgccaaagggtgtgtgcttcttcacgtttccatggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gatagggattttcagagcttcttcgccaaagggtgtgtgcttcttcacgtttccatggca 955
Query: 301 gtgtggagattcttctttgagaggaagattgaagatcttgctagtgactggcctaggcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 gtgtggagattcttctttgagaggaagattgaagatcttgctagtgactggcctaggcat 1015
Query: 361 gctgttgggaacattgcattggcagtttcatgggtcttctttcttgtgttctcatggaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 gctgttgggaacattgcattggcagtttcatgggtcttctttcttgtgttctcatggaga 1075
Query: 421 gagaagtatgattgat 436
||||||||||||||||
Sbjct: 1076 gagaagtatgattgat 1091
>gnl|LJGI|TC65866 similar to UniRef100_A7R4Q0 Cluster: Chromosome undetermined
scaffold_754, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_754,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (95%)
Length = 699
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 386 tttcatgggtcttctttcttgtgttctcatggagagagaagtatgattgat 436
|||||||||| ||||| ||||| | ||| ||||||||||||||||||||||
Sbjct: 493 tttcatgggttttcttccttgtttactcttggagagagaagtatgattgat 543
>gnl|LJGI|TC63655 similar to UniRef100_A7R4Q0 Cluster: Chromosome undetermined
scaffold_754, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_754,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (95%)
Length = 716
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 386 tttcatgggtcttctttcttgtgttctcatggagagagaagtatgattgat 436
|||||||||| ||||| ||||| | ||| ||||||||||||||||||||||
Sbjct: 525 tttcatgggttttcttccttgtttactcttggagagagaagtatgattgat 575