Miyakogusa Predicted Gene

Lj0g3v0326839.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0326839.1 NODE_63401_length_1142_cov_56.246937.path2.1
         (495 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62163 similar to UniRef100_Q2HTS9 Cluster: DNA-bindin...    58   5e-08
gnl|LJGI|TC60663 similar to UniRef100_A7QPU8 Cluster: Chromosome...    54   8e-07

>gnl|LJGI|TC62163 similar to UniRef100_Q2HTS9 Cluster: DNA-binding WRKY; VQ; n=1;
           Medicago truncatula|Rep: DNA-binding WRKY; VQ - Medicago
           truncatula (Barrel medic), partial (44%)
          Length = 1000

 Score = 58.0 bits (29), Expect = 5e-08
 Identities = 104/129 (80%)
 Strand = Plus / Plus

                                                                       
Query: 358 tcagaggaggagaaggccatagctgacaagggattctatctacacccatctcccatgtca 417
           |||||||| || || || || ||||| ||||| |||||| | || ||||||||  | |||
Sbjct: 595 tcagaggaagataaagcgattgctgaaaagggtttctatttgcatccatctccagtttca 654

                                                                       
Query: 418 actcccagaggctttgagccacagctcttacctctttttcctgtgacttcacctagagtt 477
           ||||| |||| ||  ||||| ||||| || ||||| |||||| || ||||||||||||||
Sbjct: 655 actcctagagactcagagcctcagcttttgcctctgtttcctctgtcttcacctagagtt 714

                    
Query: 478 acagagtca 486
            ||| ||||
Sbjct: 715 tcagggtca 723



 Score = 54.0 bits (27), Expect = 8e-07
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 71  catcatccagaaacttcaacatccctcccatgaagacagcacc 113
           ||||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 335 catcaaccagaaacttcaacatcccacccatcaaaacagcacc 377


>gnl|LJGI|TC60663 similar to UniRef100_A7QPU8 Cluster: Chromosome chr10 scaffold_138,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_138, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (46%)
          Length = 771

 Score = 54.0 bits (27), Expect = 8e-07
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 71  catcatccagaaacttcaacatccctcccatgaagacagcacc 113
           ||||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 446 catcaaccagaaacttcaacatcccacccatcaaaacagcacc 488