Miyakogusa Predicted Gene
- Lj0g3v0326649.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0326649.1 tr|Q00M83|Q00M83_SOYBN Zinc finger protein 1
OS=Glycine max PE=4 SV=1,74.65,0,OS04G0590900 PROTEIN,NULL; RING
FINGER PROTEIN 6/12/38,NULL; RING/U-box,NULL; seg,NULL;
zf-RING_2,Zi,CUFF.22235.1
(2133 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81348 similar to UniRef100_Q00M69 Cluster: Zinc finge... 1742 0.0
gnl|LJGI|TC66286 similar to UniRef100_Q00M69 Cluster: Zinc finge... 819 0.0
gnl|LJGI|TC69484 similar to UniRef100_Q00M69 Cluster: Zinc finge... 414 e-115
gnl|LJGI|GO011795 similar to UniRef100_Q00M69 Cluster: Zinc fing... 339 4e-92
gnl|LJGI|TC70587 homologue to UniRef100_Q00M83 Cluster: Zinc fin... 258 1e-67
gnl|LJGI|BP078791 similar to UniRef100_Q00M69 Cluster: Zinc fing... 94 4e-18
gnl|LJGI|TC61339 similar to UniRef100_A7P9L8 Cluster: Chromosome... 74 4e-12
gnl|LJGI|BP046666 66 1e-09
>gnl|LJGI|TC81348 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (35%)
Length = 918
Score = 1742 bits (879), Expect = 0.0
Identities = 909/915 (99%), Gaps = 3/915 (0%)
Strand = Plus / Plus
Query: 544 attcagcctaataatggttctgattcttttcttcttccttctgggaataatggctttcta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 attcagcctaataatggttctgattcttttcttcttccttctgggaataatggctttcta 63
Query: 604 gtagaagatactgatggtaggccaagttcttctttggacactcgacgcatgtcttgtaaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gtagaagatactgatggtaggccaagttcttctttggacactcgacgcatgtcttgtaaa 123
Query: 664 agaaaagctgttgaaggaaattcgaggcaatcttcagatggtggaggttctagctatagt 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 agaaaagctgttgaaggaaattcgaggcaatcttcagatggtggaggttctagctatagt 183
Query: 724 cagcacatagatggtagtgcttggcacacctttcctactcaggatcatgctggaagcagt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 cagcacatagatggtagtgcttggcacacctttcctactcaggatcatgctggaagcagt 243
Query: 784 tcaagcagatctatttcctcagaacatttaaatgcaagacttggcctgggtgtgggggat 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tcaagcagatctatttcctcagaacatttaaatgcaagacttggcctgggtgtgggggat 303
Query: 844 gaagcctctgaaagtgttcctgattcagacgttgcaggaagctcagaaagcttccacagg 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gaagcctctgaaagtgttcctgattcagacgttgcaggaagctcagaaagcttccacagg 363
Query: 904 aacttccgtttgagggtaaatccttcaaaccaacaaaattctgttcctccctccgcattc 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aacttccgtttgagggtaaatccttcaaaccaacaaaattctgttcctccctccgcattc 423
Query: 964 tcaactgggagcataggtaggcattctggtgtttcttcatcctctcaagtgccacaaagg 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcaactgggagcataggtaggcattctggtgtttcttcatcctctcaagtgccacaaagg 483
Query: 1024 tttcatcctgctgatgaatctctgaacttgaggtcaccaccactaatagataatgtaact 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tttcatcctgctgatgaatctctgaacttgaggtcaccaccactaatagataatgtaact 543
Query: 1084 cctcaaagccagccccttgtaatccatgctccttctttgccaaggaatcgtcaatcattt 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cctcaaagccagccccttgtaatccatgctccttctttgccaaggaatcgtcaatcattt 603
Query: 1144 agatggagtggtggttctaactcaagaaacatccattcatcaaactcttttagatgtgca 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agatggagtggtggttctaactcaagaaacatccattcatcaaactcttttagatgtgca 663
Query: 1204 gacagggataatcaatcgctggaggctgcaagctcaagaagtgtgtctagaaatatttta 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gacagggataatcaatcgctggaggctgcaagctcaagaagtgtgtctagaaatatttta 723
Query: 1264 gaacacccagtttttggaccatca-gctgatttaagaaatttgattcaaaacccgacaat 1322
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 724 gaacacccagtttttggaccatcacgctgatttaagaaatttgattcaaaacccgacaat 783
Query: 1323 tacggcttcaagttcaag-tagtgcaaatttaagtgttcct-ggaaatgttgcttcttca 1380
|||||||||||||||||| |||||||||| || |||||||| ||||||||||||||||||
Sbjct: 784 tacggcttcaagttcaagctagtgcaaatgtacgtgttcctgggaaatgttgcttcttca 843
Query: 1381 tcaaggactggatcgaatttagctaccaatctctcatctacctcaacttggggatctcgt 1440
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 844 tcaaggactggatcgaatttagctaccaatctctcatctacctcaactgggggatctcgt 903
Query: 1441 cctaatcctccgcag 1455
|||||||||||||||
Sbjct: 904 cctaatcctccgcag 918
>gnl|LJGI|TC66286 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (15%)
Length = 703
Score = 819 bits (413), Expect = 0.0
Identities = 413/413 (100%)
Strand = Plus / Plus
Query: 1 atgcaagggcagagcggtacaattgattccttagctgaaatgttagagctagaatttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgcaagggcagagcggtacaattgattccttagctgaaatgttagagctagaatttgaa 350
Query: 61 tgtggaccaacaccaagtaatactactgcggatcagcatacatattggaataatatgcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgtggaccaacaccaagtaatactactgcggatcagcatacatattggaataatatgcgg 410
Query: 121 aatccgacagaaaatcaaatacctgattatatactttctcctagtgacataagcccatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aatccgacagaaaatcaaatacctgattatatactttctcctagtgacataagcccatct 470
Query: 181 catgtgaattcaataaatcatgaatggcaaaatttgagtggatggagcttaggcgagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 catgtgaattcaataaatcatgaatggcaaaatttgagtggatggagcttaggcgagcca 530
Query: 241 agttccagtaatacacagaatgaaatagatgataatgaacagaaaagagaacttggatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agttccagtaatacacagaatgaaatagatgataatgaacagaaaagagaacttggatgg 590
Query: 301 tcatcatccattagtgctggtgcattagctggtccaagacttgaagatcggcgccttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tcatcatccattagtgctggtgcattagctggtccaagacttgaagatcggcgccttgat 650
Query: 361 ccaagcaatgctctttcgctggatgatgtcaacaccggtcctgtgtatgaccg 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 ccaagcaatgctctttcgctggatgatgtcaacaccggtcctgtgtatgaccg 703
>gnl|LJGI|TC69484 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (22%)
Length = 802
Score = 414 bits (209), Expect = e-115
Identities = 464/549 (84%)
Strand = Plus / Plus
Query: 1585 tcatctggggctcacccaagatcatcttcatggttggagaggcaaggagatagtgacttt 1644
|||||||||| | ||||| || || ||||||||||||||||| || |||||||| |||
Sbjct: 21 tcatctggggttaacccaggagcagcttcatggttggagaggtcagctgatagtgagttt 80
Query: 1645 ggatttccttattcactacgttctttagctgttgctggtgaaggaagtagtagacttgta 1704
||| |||| | || |||| ||||| |||||||| ||||||||| | | ||||||||||
Sbjct: 81 ggaattccccaatccttacgatctttggctgttgccggtgaaggaggcaatagacttgta 140
Query: 1705 tctgagctccgcaatgtcttgggccttatgcgtcggggaggaaacctgcgatttgaggat 1764
||||||||||||||||| |||||||| |||||| |||| || ||||||||| ||||||||
Sbjct: 141 tctgagctccgcaatgtattgggcctcatgcgtaggggtgggaacctgcgacttgaggat 200
Query: 1765 gttatggtccttgatcaatcagtgttttctggaatcgctgatattcatgatcgtcatagg 1824
|||||| |||| || || ||| ||||| ||||||| ||| |||||||||| || || |||
Sbjct: 201 gttatgatcctcgaccagtcaatgtttgctggaattgctaatattcatgaccgacacagg 260
Query: 1825 gatatgcgacttgatgttgataacatgtcttatgaggagcttttggctctggaagagcgc 1884
||||||||||||||||| |||||||||||||||||||| | |||||||||||||| |||
Sbjct: 261 gatatgcgacttgatgtcgataacatgtcttatgaggaattattggctctggaagaacgc 320
Query: 1885 attggaaacgtgagtactgggttgagcgaggaaatgatattgaaacttataaaacagaaa 1944
|||||||| |||| |||||| |||| ||||| | ||| |||||||| | ||||||||
Sbjct: 321 attggaaatgtgaatactggattgactgaggagaccataatgaaacttctgaaacagaag 380
Query: 1945 aagcattcagttgaaacaggatctcaatttgatgcagaaccctgttgtgtttgtcaggag 2004
|| |||| | |||| |||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 381 aaatattcggctgaaccaggatctcagggtgatgcagaaccctgctgtgtttgtcaggag 440
Query: 2005 gactacaatgatggagatgatattggaacacttgattgcggccatgatttccatagctac 2064
|| |||||||||||||||||||| ||| | || ||||||| ||| || |||||
Sbjct: 441 gagtacaatgatggagatgatatcggatcgctcaattgcgggcatttttaccatactggg 500
Query: 2065 tgtattaaacagtggcttatgcataagaatctgtgtcccatttgtaagacaacaggcttg 2124
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 501 tgtattaaacagtggctaatgcataagaacctgtgtcccatttgtaagacaacagggttg 560
Query: 2125 tcaacatga 2133
||| ||||
Sbjct: 561 gcaaaatga 569
>gnl|LJGI|GO011795 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (17%)
Length = 600
Score = 339 bits (171), Expect = 4e-92
Identities = 360/423 (85%)
Strand = Plus / Plus
Query: 1711 ctccgcaatgtcttgggccttatgcgtcggggaggaaacctgcgatttgaggatgttatg 1770
||||||||||| |||||||| |||||| |||| || ||||||||| ||||||||||||||
Sbjct: 170 ctccgcaatgtattgggcctcatgcgtaggggtgggaacctgcgacttgaggatgttatg 229
Query: 1771 gtccttgatcaatcagtgttttctggaatcgctgatattcatgatcgtcatagggatatg 1830
|||| || || ||| ||||| ||||||| ||| |||||||||| || || |||||||||
Sbjct: 230 atcctcgaccagtcaatgtttgctggaattgctaatattcatgaccgacacagggatatg 289
Query: 1831 cgacttgatgttgataacatgtcttatgaggagcttttggctctggaagagcgcattgga 1890
||||||||||| |||||||||||||||||||| | |||||||||||||| |||||||||
Sbjct: 290 cgacttgatgtcgataacatgtcttatgaggaattattggctctggaagaacgcattgga 349
Query: 1891 aacgtgagtactgggttgagcgaggaaatgatattgaaacttataaaacagaaaaagcat 1950
|| |||| |||||| |||| ||||| | ||| |||||||| | |||||||| || ||
Sbjct: 350 aatgtgaatactggattgactgaggagaccataatgaaacttctgaaacagaagaaatat 409
Query: 1951 tcagttgaaacaggatctcaatttgatgcagaaccctgttgtgtttgtcaggaggactac 2010
|| | |||| |||||||||| ||||||||||||||| ||||||||||||||||| |||
Sbjct: 410 tcggctgaaccaggatctcagggtgatgcagaaccctgctgtgtttgtcaggaggagtac 469
Query: 2011 aatgatggagatgatattggaacacttgattgcggccatgatttccatagctactgtatt 2070
||||||||||||||||| ||| | || ||||||| ||| || ||||| ||||||
Sbjct: 470 aatgatggagatgatatcggatcgctcaattgcgggcatttttaccatactgggtgtatt 529
Query: 2071 aaacagtggcttatgcataagaatctgtgtcccatttgtaagacaacaggcttgtcaaca 2130
||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| ||| |
Sbjct: 530 aaacagtggctaatgcataagaacctgtgtcccatttgtaagacaacagggttggcaaaa 589
Query: 2131 tga 2133
|||
Sbjct: 590 tga 592
>gnl|LJGI|TC70587 homologue to UniRef100_Q00M83 Cluster: Zinc finger protein 1; n=1;
Glycine max|Rep: Zinc finger protein 1 - Glycine max
(Soybean), partial (6%)
Length = 530
Score = 258 bits (130), Expect = 1e-67
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 2004 ggactacaatgatggagatgatattggaacacttgattgcggccatgatttccatagcta 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggactacaatgatggagatgatattggaacacttgattgcggccatgatttccatagcta 60
Query: 2064 ctgtattaaacagtggcttatgcataagaatctgtgtcccatttgtaagacaacaggctt 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtattaaacagtggcttatgcataagaatctgtgtcccatttgtaagacaacaggctt 120
Query: 2124 gtcaacatga 2133
||||||||||
Sbjct: 121 gtcaacatga 130
Score = 79.8 bits (40), Expect = 6e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 2094 tctgtgtcccatttgtaagacaacaggcttgtcaacatga 2133
||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tctgtgtcccatttgtaagacaacaggcttgtcaacatga 456
>gnl|LJGI|BP078791 similar to UniRef100_Q00M69 Cluster: Zinc finger protein; n=1;
Glycine max|Rep: Zinc finger protein - Glycine max
(Soybean), partial (10%)
Length = 493
Score = 93.7 bits (47), Expect = 4e-18
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 1435 tctcgtcctaatcctccgcagcatccccggaggttatctgaatatgctcgacggtccttg 1494
|||||||| ||||||| |||| |||| || |||||||||||||||| ||| ||||||||
Sbjct: 254 tctcgtcccaatcctcagcagtatcctcgtaggttatctgaatatgttcgtcggtcctta 313
Query: 1495 ttttcttctggttccgatgctactggaggtccaagcaataattattc 1541
||||| ||||||| || ||| ||||| ||||||||||||| |||||
Sbjct: 314 ttttcccctggttctgaagctgctggaagtccaagcaataactattc 360
>gnl|LJGI|TC61339 similar to UniRef100_A7P9L8 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (37%)
Length = 2557
Score = 73.8 bits (37), Expect = 4e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 1828 atgcgacttgatgttgataacatgtcttatgaggagcttttggctctggaagagcgcatt 1887
||||| ||||||||||||||||||||||||||||| || ||||| ||||||||| ||
Sbjct: 1904 atgcgccttgatgttgataacatgtcttatgaggaactattggcattggaagagcaaata 1963
Query: 1888 ggaaacgtgagtactgggttgagcgagga 1916
||| | ||||| ||||| ||||| |||||
Sbjct: 1964 ggagatgtgagcactggattgagtgagga 1992
>gnl|LJGI|BP046666
Length = 253
Score = 65.9 bits (33), Expect = 1e-09
Identities = 100/112 (89%), Gaps = 9/112 (8%)
Strand = Plus / Minus
Query: 2012 atgatggagatgatatt-ggaacac-ttgattgcggcca--tgatttcca-tagcta-ct 2065
||||||||||||||||| ||||| | |||||||||||| ||||||||| |||||| ||
Sbjct: 229 atgatggagatgatatttggaaccccttgattgcggcccactgatttccactagctatct 170
Query: 2066 gtattaaaca-gtggcttatgca-taagaatctgtgtccca-tttgtaagac 2114
||||||||| |||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 169 gtattaaacccgtggcttatgcactaagaatctgtgtcccactttgtaagac 118