Miyakogusa Predicted Gene
- Lj0g3v0326259.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0326259.1 Non Chatacterized Hit- tr|F1QU12|F1QU12_DANRE
Uncharacterized protein (Fragment) OS=Danio rerio
PE=4,30,2e-18,ZINC_FINGER_C2H2_1,Zinc finger, C2H2; zf-C2H2,Zinc
finger, C2H2; zf-C2H2_4,NULL; seg,NULL; zinc fing,CUFF.22180.1
(1083 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63039 weakly similar to UniRef100_A7PTH8 Cluster: Chr... 1136 0.0
gnl|LJGI|GO020527 weakly similar to UniRef100_Q06HM7 Cluster: Tr... 985 0.0
gnl|LJGI|TC74106 similar to UniRef100_A7PTH8 Cluster: Chromosome... 476 e-133
>gnl|LJGI|TC63039 weakly similar to UniRef100_A7PTH8 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (46%)
Length = 860
Score = 1136 bits (573), Expect = 0.0
Identities = 573/573 (100%)
Strand = Plus / Plus
Query: 511 agatatgcatcaaagctacggaagcatgaagattctcatgttaagctggactcagttgac 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatatgcatcaaagctacggaagcatgaagattctcatgttaagctggactcagttgac 60
Query: 571 gtcgtgtgcttagaacctggatgcatgaaacatttcactaatgcccagtgtcttagagac 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgtgtgcttagaacctggatgcatgaaacatttcactaatgcccagtgtcttagagac 120
Query: 631 catgttaagtcctgccatcaatacgtgacttgtgacatttgtgggactaagcaactgaag 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgttaagtcctgccatcaatacgtgacttgtgacatttgtgggactaagcaactgaag 180
Query: 691 aagaatttgaagaggcacctccgtgcacatgaagccggcagttcatcagagttgtttcaa 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaatttgaagaggcacctccgtgcacatgaagccggcagttcatcagagttgtttcaa 240
Query: 751 tgtgaatatgagggttgtgactgtacattctcatcaaaacctaatcttcacacgcatgag 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgtgaatatgagggttgtgactgtacattctcatcaaaacctaatcttcacacgcatgag 300
Query: 811 aaggctgtgcacttcaaagaaaaaccttatgtgtgtgggtttcctgattgtggcatgaga 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggctgtgcacttcaaagaaaaaccttatgtgtgtgggtttcctgattgtggcatgaga 360
Query: 871 tttgcatacaaacatgtgagagataaccatgaacaaactgccaaacatgtttttaccctt 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttgcatacaaacatgtgagagataaccatgaacaaactgccaaacatgtttttaccctt 420
Query: 931 ggggattttgaagaagctgatgaacaattcaggtctaggcccagaggagggagaaagaga 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggggattttgaagaagctgatgaacaattcaggtctaggcccagaggagggagaaagaga 480
Query: 991 gtatgccctactgttgaaatgttaattaggaagagagttaccccaccaagtcaattagag 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtatgccctactgttgaaatgttaattaggaagagagttaccccaccaagtcaattagag 540
Query: 1051 agctggttacatatgcaggatagtgaataagat 1083
|||||||||||||||||||||||||||||||||
Sbjct: 541 agctggttacatatgcaggatagtgaataagat 573
>gnl|LJGI|GO020527 weakly similar to UniRef100_Q06HM7 Cluster: Transcription factor
IIIA; n=1; Solanum lycopersicum|Rep: Transcription
factor IIIA - Solanum lycopersicum (Tomato)
(Lycopersicon esculentum), partial (31%)
Length = 801
Score = 985 bits (497), Expect = 0.0
Identities = 563/578 (97%), Gaps = 7/578 (1%)
Strand = Plus / Plus
Query: 1 atggttgaatctatggaatctgaagaaatccccaaattccatgatattagacgctatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atggttgaatctatggaatctgaagaaatccccaaattccatgatattagacgctatttc 290
Query: 61 tgtgaatactgcggtatctgcagatccnnnnnnnccctcatcacagctcacatcaattca 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 291 tgtgaatactgcggtatctgcagatccaaaaaaaccctcatcacagctcacatcaattca 350
Query: 121 caccacaaggaggaggtggaaaaaagagttgaaggagaatctgaaacagaggcttcaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 caccacaaggaggaggtggaaaaaagagttgaaggagaatctgaaacagaggcttcaaag 410
Query: 181 cctaaaacttgtgagcaatgtggtgctagtttcaaaaaacatgcctacttgttgcagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cctaaaacttgtgagcaatgtggtgctagtttcaaaaaacatgcctacttgttgcagcac 470
Query: 241 atgcgaagtcattcggctgagaggccatatgtgtgtactgttgatgattgtaaggcaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atgcgaagtcattcggctgagaggccatatgtgtgtactgttgatgattgtaaggcaagt 530
Query: 301 tacagaagaaaggaccacttgactcgccaccttttacagcaccaggggaaaactttcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tacagaagaaaggaccacttgactcgccaccttttacagcaccaggggaaaactttcaag 590
Query: 361 tgtcctattgagaattgcaacagtagcttctctatacaaagcaatttgaaaagacatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgtcctattgagaattgcaacagtagcttctctatacaaagcaatttgaaaagacatgtc 650
Query: 421 gatgagcttcacgatggcaagtctacctctacttgtgttgaaagtcagaagcagtatgtg 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gatgagcttcacgatggtaagtctacctctacttgtgttgaaagtcagaagcagtatgtg 710
Query: 481 tgtccagaagttggctgtggaaaggttttcagatatgcatcaaagctacggaagcatgaa 540
|||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||| |
Sbjct: 711 tgtccagaag-tggctgtggaaa-gttttcagatatgcatc-aagctac-gaagcatg-a 765
Query: 541 gattctcatgttaagctggactcagttgacgtcgtgtg 578
|| ||||||||| |||||||||||||||||||||||||
Sbjct: 766 ga-tctcatgtt-agctggactcagttgacgtcgtgtg 801
>gnl|LJGI|TC74106 similar to UniRef100_A7PTH8 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 820
Score = 476 bits (240), Expect = e-133
Identities = 254/261 (97%)
Strand = Plus / Plus
Query: 1 atggttgaatctatggaatctgaagaaatccccaaattccatgatattagacgctatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atggttgaatctatggaatctgaagaaatccccaaattccatgatattagacgctatttc 195
Query: 61 tgtgaatactgcggtatctgcagatccnnnnnnnccctcatcacagctcacatcaattca 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 196 tgtgaatactgcggtatctgcagatccaaaaaaaccctcatcacagctcacatcaattca 255
Query: 121 caccacaaggaggaggtggaaaaaagagttgaaggagaatctgaaacagaggcttcaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caccacaaggaggaggtggaaaaaagagttgaaggagaatctgaaacagaggcttcaaag 315
Query: 181 cctaaaacttgtgagcaatgtggtgctagtttcaaaaaacatgcctacttgttgcagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cctaaaacttgtgagcaatgtggtgctagtttcaaaaaacatgcctacttgttgcagcac 375
Query: 241 atgcgaagtcattcggctgag 261
|||||||||||||||||||||
Sbjct: 376 atgcgaagtcattcggctgag 396
Score = 474 bits (239), Expect = e-133
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 260 agaggccatatgtgtgtactgttgatgattgtaaggcaagttacagaagaaaggaccact 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 agaggccatatgtgtgtactgttgatgattgtaaggcaagttacagaagaaaggaccact 641
Query: 320 tgactcgccaccttttacagcaccaggggaaaactttcaagtgtcctattgagaattgca 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgactcgccaccttttacagcaccaggggaaaactttcaagtgtcctattgagaattgca 701
Query: 380 acagtagcttctctatacaaagcaatttgaaaagacatgtcgatgagcttcacgatggca 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 acagtagcttctctatacaaagcaatttgaaaagacatgtcgatgagcttcacgatggca 761
Query: 440 agtctacctctacttgtgttgaaagtcagaagcagtatgtgtgtccagaagttggctgt 498
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 agtctacctctacttgtgttgaaagtcagaagcagtatgtgtgtccagaagttggctgt 820