Miyakogusa Predicted Gene
- Lj0g3v0326059.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0326059.1 Non Chatacterized Hit- tr|K3YYY6|K3YYY6_SETIT
Uncharacterized protein OS=Setaria italica GN=Si019492,50.62,5e-19,ABC
TRANSPORTER,NULL; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A
(ABCA),ABC transporter A, ABCA,CUFF.22163.1
(265 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63647 similar to UniRef100_A7QI68 Cluster: Chromosome... 502 e-142
gnl|LJGI|TC80520 similar to UniRef100_A7QI68 Cluster: Chromosome... 412 e-115
gnl|LJGI|TC62362 similar to UniRef100_A7QI68 Cluster: Chromosome... 202 8e-52
gnl|LJGI|TC72727 similar to UniRef100_A7QI68 Cluster: Chromosome... 182 7e-46
>gnl|LJGI|TC63647 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1143
Score = 502 bits (253), Expect = e-142
Identities = 262/265 (98%)
Strand = Plus / Plus
Query: 1 atgacaacatcttccgatcatgagagggaagtggagagcctggtgatgaagctcacccca 60
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 671 atgacaacatcttccgatcacgagagggaagtggagaacctggtgatgaagctcacccca 730
Query: 61 aatgccaacaagatataccatctctctggtacccagaagtttgagctgccaaaagaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aatgccaacaagatataccatctctctggtacccagaagtttgagctgccaaaagaggag 790
Query: 121 gttagaatagctgatgtattccgagcagtggaagctgcaaagaagaacttcactgtttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gttagaatagctgatgtattccgagcagtggaagctgcaaagaagaacttcactgtttct 850
Query: 181 gcatggggtttagctgacaccacattggaagatgttttcatcaaggttgcacgtgaggct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 851 gcatggggtttagctgacaccacattggaagatgttttcatcaaggttgcacatgaggct 910
Query: 241 caggcatttgataccttgtcttaat 265
|||||||||||||||||||||||||
Sbjct: 911 caggcatttgataccttgtcttaat 935
>gnl|LJGI|TC80520 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 581
Score = 412 bits (208), Expect = e-115
Identities = 257/267 (96%), Gaps = 5/267 (1%)
Strand = Plus / Plus
Query: 1 atgacaacatcttccgatcatgagagggaagtggagagcctggtgatgaagctcacccca 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgacaacatcttcagatcatgagagggaagtggagagcctggtgatgaagctcacccca 133
Query: 61 aatgccaacaagatataccatctctctggtacccagaagtttgagctgccaaaagaggag 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134 aatgccaacaagatataccatctctctggtacccagaagtttgagctgccnaaagaggag 193
Query: 121 gttagaatagctgatgtattccgagca-gtggaagctgc-aaagaagaacttcact-gtt 177
||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| |||
Sbjct: 194 tttagaattgctgatgtattccgagcaggtggaagctgcaaaagaagaacttcactggtt 253
Query: 178 tctgcatggggtttagct-gacaccacat-tggaagatgttttcatcaaggttgcacgtg 235
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 254 tctgcatggggtttagctggacaccacatgtggaagatgttttcatcaaggttgcacgtg 313
Query: 236 aggctcaggcatttgataccttgtctt 262
|||||||||||||||||||| ||||||
Sbjct: 314 aggctcaggcatttgataccctgtctt 340
>gnl|LJGI|TC62362 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1112
Score = 202 bits (102), Expect = 8e-52
Identities = 183/210 (87%)
Strand = Plus / Plus
Query: 56 ccccaaatgccaacaagatataccatctctctggtacccagaagtttgagctgccaaaag 115
|||||||||| |||||||| || ||| |||||||||| |||||||||||| |||||||||
Sbjct: 557 ccccaaatgctaacaagatttatcatatctctggtactcagaagtttgagttgccaaaag 616
Query: 116 aggaggttagaatagctgatgtattccgagcagtggaagctgcaaagaagaacttcactg 175
| || |||||||||| |||||||| ||| || ||| ||||||||| |||||||| |
Sbjct: 617 acgatgttagaatagggagtgtattccaagctgttgaaactgcaaagagaaacttcacag 676
Query: 176 tttctgcatggggtttagctgacaccacattggaagatgttttcatcaaggttgcacgtg 235
||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct: 677 tttctgcatggggtttagctgacaccacactggaagatgtcttcattaaggttgcacgtg 736
Query: 236 aggctcaggcatttgataccttgtcttaat 265
|||| |||||||||| | |||||| ||||
Sbjct: 737 gggctaaggcatttgacatcttgtcataat 766
>gnl|LJGI|TC72727 similar to UniRef100_A7QI68 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 554
Score = 182 bits (92), Expect = 7e-46
Identities = 170/196 (86%)
Strand = Plus / Plus
Query: 56 ccccaaatgccaacaagatataccatctctctggtacccagaagtttgagctgccaaaag 115
|||||||||| |||||||| || ||| |||||||||| |||||||||||| |||||||||
Sbjct: 26 ccccaaatgctaacaagatttatcatatctctggtactcagaagtttgagttgccaaaag 85
Query: 116 aggaggttagaatagctgatgtattccgagcagtggaagctgcaaagaagaacttcactg 175
| || |||||||||| ||||||||| || || ||| ||||||||| |||||||| |
Sbjct: 86 acgatgttagaatagggagtgtattccgggctgttgaaactgcaaagagaaacttcacag 145
Query: 176 tttctgcatggggtttagctgacaccacattggaagatgttttcatcaaggttgcacgtg 235
|||||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||| |
Sbjct: 146 tttctgcatggggtttagctgataccacactggaagatgtcttcattaaggttgcacgcg 205
Query: 236 aggctcaggcatttga 251
|||| ||||||||||
Sbjct: 206 gggctaaggcatttga 221