Miyakogusa Predicted Gene

Lj0g3v0325879.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0325879.1 Non Chatacterized Hit- tr|I1MDL1|I1MDL1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2934
PE=,92.04,0,SUBFAMILY NOT NAMED,NULL; NFRKB-RELATED,Nuclear factor
related to kappa-B-binding protein; seg,NULL,CUFF.22146.1
         (1019 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76669 similar to UniRef100_Q2HU34 Cluster: Nuclear fa...   644   0.0  

>gnl|LJGI|TC76669 similar to UniRef100_Q2HU34 Cluster: Nuclear factor related to
            kappa-B-binding protein , related; n=1; Medicago
            truncatula|Rep: Nuclear factor related to kappa-B-binding
            protein , related - Medicago truncatula (Barrel medic),
            partial (8%)
          Length = 777

 Score =  644 bits (325), Expect = 0.0
 Identities = 330/332 (99%)
 Strand = Plus / Plus

                                                                        
Query: 688  gctgtaactgttgctcagcaaggaactgaggagcaaagcggatatgatttatgctcagat 747
            ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 1    gctgtaactgttgctcagcaaggaactgaggagcaagncggatatgatttatgctcagat 60

                                                                        
Query: 748  ctcaatgtcgatccgccagtcattgacgatgacaaaggagtggaatttttgtctagtgat 807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctcaatgtcgatccgccagtcattgacgatgacaaaggagtggaatttttgtctagtgat 120

                                                                        
Query: 808  accagaccaaacgcagaggaccatgttgatgtcaatcctgcatctgaagaaggcaatgtt 867
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  accagaccaaacgcagaggaccatgttgatgtcaatcctgcatctgaagaaggcaatgtt 180

                                                                        
Query: 868  tgtgagggtaattcaatggcttgggaggctctcagcttaaatcctactgccacaggagag 927
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tgtgagggtaattcaatggcttgggaggctctcagcttaaatcctactgccacaggagag 240

                                                                        
Query: 928  ttatgccaagaaaattcaacaaatgaagattttgatgaggaatccttcgggagggaaagg 987
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ttatgccaagaaaattcaacaaatgaagattttgatgaggaatccttcgggagggaaagg 300

                                            
Query: 988  cctgttggcctactaagtgcaagcctatagag 1019
            ||||||||||||||||||||||||||||||||
Sbjct: 301  cctgttggcctactaagtgcaagcctatagag 332