Miyakogusa Predicted Gene
- Lj0g3v0325829.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0325829.2 Non Chatacterized Hit- tr|I1MJM3|I1MJM3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3736
PE=,83.07,0,Surp,SWAP/Surp; G-patch,G-patch domain;
Suppressor-of-White-APricot splicing regulat,SWAP/Surp;
glyc,CUFF.22144.2
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV407318 similar to UniRef100_A7QWV9 Cluster: Chromosom... 674 0.0
gnl|LJGI|TC58661 similar to UniRef100_A7QWV9 Cluster: Chromosome... 476 e-133
gnl|LJGI|AV417754 similar to UniRef100_A7QWV9 Cluster: Chromosom... 309 2e-83
gnl|LJGI|TC75053 homologue to UniRef100_Q6ENK8 Cluster: Splicing... 159 5e-38
gnl|LJGI|AW720262 similar to UniRef100_A7QWV9 Cluster: Chromosom... 101 1e-20
gnl|LJGI|TC63426 similar to UniRef100_Q94C11 Cluster: Splicing f... 96 7e-19
>gnl|LJGI|AV407318 similar to UniRef100_A7QWV9 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 428
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 1 atggacaagggggtgccacctgccatcttcgcaaatgatggttcatttatggaaaggttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atggacaagggggtgccacctgccatcttcgcaaatgatggttcatttatggaaaggttc 148
Query: 61 aagcaacttcaacaagagcagggaaaggggaagaatgtcaacatcaaggattctaaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 aagcaacttcaacaagagcagggaaaggggaagaatgtcaacatcaaggattctaaacca 208
Query: 121 attaaagttatatcagggtctttgtcttctaatccttccattagtaaaatgtcagtggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 attaaagttatatcagggtctttgtcttctaatccttccattagtaaaatgtcagtggac 268
Query: 181 ttgaaggcaagtgatgcacataaaacaccccaagctggttccagtggcaagctagctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttgaaggcaagtgatgcacataaaacaccccaagctggttccagtggcaagctagctttc 328
Query: 241 agtttaaaacaaaagtctaagctggtgccaccacctgttaagttaagtgctgatgaggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agtttaaaacaaaagtctaagctggtgccaccacctgttaagttaagtgctgatgaggat 388
Query: 301 gaagaagaaacagatgttgcggatgttccaaatgatgcac 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaagaagaaacagatgttgcggatgttccaaatgatgcac 428
>gnl|LJGI|TC58661 similar to UniRef100_A7QWV9 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 796
Score = 476 bits (240), Expect = e-133
Identities = 617/744 (82%), Gaps = 9/744 (1%)
Strand = Plus / Plus
Query: 408 acctccttctccaagtgatcctacagtgaagaaagtagctgacaaactggcaagttttgt 467
||||||||| || ||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 53 acctccttcacctagtgatcctactgtgaagaaagttgctgacaaactagcaagttttgt 112
Query: 468 ggctagaaatggaaggcgatttgaggatgtcacacgttcaaaaaatcctggggatacacc 527
||| | ||| ||||||| |||||||||||| ||||| |||||||||||| ||||||||
Sbjct: 113 ggcaaaaaacggaaggcaatttgaggatgttacacgccaaaaaaatcctggcgatacacc 172
Query: 528 tttcaagtttttatttgatgagagatgtgctgactacaagtattatgaatatcaacttgc 587
||||||||||||||||||||| |||||||||||||||| |||||||||||| || |
Sbjct: 173 tttcaagtttttatttgatgaacgatgtgctgactacaaatattatgaatataggctcgg 232
Query: 588 tcaagaggaaaaggctcatatgcagtcccaggaatcacaggcgcctcctaatgg------ 641
|||||||||||| | | | |||||| |||| ||||||| || | |||
Sbjct: 233 acaagaggaaaagacccttttgcagtatagggaaccacaggcaattcattatgttccgcc 292
Query: 642 ---gtgtacaagcacttcgtcttccatacagacaaatggtcctcaaaaatcatctcagca 698
| ||||||||| |||||||||| || ||||||||||||| | || ||| ||||
Sbjct: 293 actgggtacaagcatatcgtcttccagaccagcaaatggtcctcagaggtcttctgagca 352
Query: 699 gcgtacagcctaccaaatccctgcatctgctttatatgaaagtggtggcaattcaagggc 758
||| || | |||||||||||||| |||||||||||||||||||||| |||| |
Sbjct: 353 gcggccaacttaccaaatccctgcttctgctttatatgaaagtggtgatgtaccaagaac 412
Query: 759 ttctgtatcttcaattcaaacattatcagcaggaagcattgaggaacccagtgtttcatc 818
||| | ||||||| | ||| ||||||||| | |||| || || ||||||| |||||
Sbjct: 413 ttcgggatcttcagtgcaagcattatcagttgtaagctctgctgagcccagtggatcatc 472
Query: 819 aagtgctgattccttagcactgatggagttctacatgaagaaagctgcacaggaagaaaa 878
|| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 473 aaatgctgattctttagcactaatggagttctacatgaagaaagctgcacgggaagaaag 532
Query: 879 gtttaaacaacctaagcagtcaaaagatgagatgccccctcctgcttctcttcaaggtaa 938
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 533 gtcaaaacaacctaagcagtcaaaagatgagatgccccctcctgcttctcttcaagggaa 592
Query: 939 gaaaggccatcacatggatgatttcattccaccggaagaacttaataagttcttggctag 998
|||||||||||| |||| ||||| ||||| | ||||||||| | |||||| |||||||
Sbjct: 593 gaaaggccatcatatgggtgattatattccccttgaagaacttgagaagttcatggctag 652
Query: 999 ctgtaatgatgctgcagcacagaaagctgccctggaggctgcagagagggctaaaatcca 1058
|||||||||||||| ||||||||||| | |||| ||||||||| ||| ||||||||
Sbjct: 653 ctgtaatgatgctggagcacagaaagttttgaaggagactgcagagaaggccaaaatcca 712
Query: 1059 ggctgataacgttggtcataagctcttgtcaaaaatgggttggaaagaaggtgagggtct 1118
||| ||||| || || || ||||| | |||||||||||||||||||||||||||||| |
Sbjct: 713 ggcggataatgtgggccacaagcttctatcaaaaatgggttggaaagaaggtgagggttt 772
Query: 1119 gggcggctctaggaagggcatttc 1142
|||||||| |||||||| |||||
Sbjct: 773 aggcggctccaggaagggtatttc 796
>gnl|LJGI|AV417754 similar to UniRef100_A7QWV9 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 156
Score = 309 bits (156), Expect = 2e-83
Identities = 156/156 (100%)
Strand = Plus / Plus
Query: 462 ttttgtggctagaaatggaaggcgatttgaggatgtcacacgttcaaaaaatcctgggga 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttttgtggctagaaatggaaggcgatttgaggatgtcacacgttcaaaaaatcctgggga 60
Query: 522 tacacctttcaagtttttatttgatgagagatgtgctgactacaagtattatgaatatca 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacacctttcaagtttttatttgatgagagatgtgctgactacaagtattatgaatatca 120
Query: 582 acttgctcaagaggaaaaggctcatatgcagtccca 617
||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttgctcaagaggaaaaggctcatatgcagtccca 156
>gnl|LJGI|TC75053 homologue to UniRef100_Q6ENK8 Cluster: Splicing factor 4-like
protein; n=2; Oryza sativa Japonica Group|Rep: Splicing
factor 4-like protein - Oryza sativa subsp. japonica
(Rice), partial (17%)
Length = 502
Score = 159 bits (80), Expect = 5e-38
Identities = 125/140 (89%)
Strand = Plus / Plus
Query: 1178 acttgggggttggtgctcacgaacctggggaggtgactgctgaggatgacatatatgagc 1237
||||||| || |||||| | ||||||||||||||||| |||| |||||||||||||| |
Sbjct: 12 acttgggagtaggtgctgtccaacctggggaggtgacttctgaagatgacatatatgacc 71
Query: 1238 agtacaagaagcggatgatgctcggctaccgccacagacccaatcctctgaacaatcctc 1297
||||| | ||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 72 agtaccaaaagcgcatgatgcttggctaccgtcacagacccaatcctctgaacaatcctc 131
Query: 1298 gcaaggcttattattgaaca 1317
||||||| ||||| ||||||
Sbjct: 132 gcaaggcgtattactgaaca 151
>gnl|LJGI|AW720262 similar to UniRef100_A7QWV9 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 579
Score = 101 bits (51), Expect = 1e-20
Identities = 146/177 (82%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 192 tgatgcacataaaacaccccaagctggttccagtggcaagctagctttcagtttaaaaca 251
|||||||| ||||| |||| |||||||| |||||||| || |||||||||||||| ||
Sbjct: 379 tgatgcacgaaaaacttcccaggctggttctagtggcaaacttgctttcagtttaaagca 438
Query: 252 aaagtctaagctggtgccaccacctgttaagttaagtgctgatgaggatgaagaagaaac 311
||| || ||||| || ||||| ||| ||||||| | ||||||||||||||||||||||
Sbjct: 439 aaaatcaaagctagttccaccccctattaagttga---ctgatgaggatgaagaagaaac 495
Query: 312 agatgttgcggatgttccaaatgatgcaccacagaaacggcaaaagttaggccagga 368
||| | ||||||| ||||||| ||||| ||||||||||||||| || |||||
Sbjct: 496 taatgccggggatgtttcaaatgacgcaccgtcgaaacggcaaaagttgggtcagga 552
>gnl|LJGI|TC63426 similar to UniRef100_Q94C11 Cluster: Splicing factor 4-like protein;
n=1; Arabidopsis thaliana|Rep: Splicing factor 4-like
protein - Arabidopsis thaliana (Mouse-ear cress), partial
(7%)
Length = 1245
Score = 95.6 bits (48), Expect = 7e-19
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 34 aatgatggttcatttatggaaaggttcaagcaacttcaacaagagcagggaaaggggaag 93
||||||||||| || |||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 1052 aatgatggttcgttcatggcgaggttcaagcagcttcaacaagagcaggggaaggggaag 1111
Query: 94 aatgtcaacatcaaggattctaaaccaattaaagtt 129
||| ||| | |||||||||||||||||||||||
Sbjct: 1112 aataccaaattagaggattctaaaccaattaaagtt 1147