Miyakogusa Predicted Gene
- Lj0g3v0324999.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0324999.1 Non Chatacterized Hit- tr|I1JRI0|I1JRI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27930
PE,92.05,0,SUBFAMILY NOT NAMED,NULL; TRAFFICKING PROTEIN PARTICLE
COMPLEX SUBUNIT 6B,NULL; Ligand-binding domai,CUFF.22086.1
(531 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61877 homologue to UniRef100_A2Q3F3 Cluster: Transpor... 1053 0.0
gnl|LJGI|FS328922 homologue to UniRef100_A2Q3F3 Cluster: Transpo... 912 0.0
gnl|LJGI|TC78289 60 1e-08
>gnl|LJGI|TC61877 homologue to UniRef100_A2Q3F3 Cluster: Transport protein particle
(TRAPP) component, Bet3; n=1; Medicago truncatula|Rep:
Transport protein particle (TRAPP) component, Bet3 -
Medicago truncatula (Barrel medic), complete
Length = 1140
Score = 1053 bits (531), Expect = 0.0
Identities = 531/531 (100%)
Strand = Plus / Plus
Query: 1 atggtgagggaagtgtcagagagttgcgtggatagcttgttgacggagatggtttcgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atggtgagggaagtgtcagagagttgcgtggatagcttgttgacggagatggtttcgtgc 308
Query: 61 tattgcaatcgattctacgccaacaagcctgaactcgctgctcgcaggatcgaggccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tattgcaatcgattctacgccaacaagcctgaactcgctgctcgcaggatcgaggccatt 368
Query: 121 ggataccaggtcggtcaccagctttctgaaaggtataccatggagcggcctcggttcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggataccaggtcggtcaccagctttctgaaaggtataccatggagcggcctcggttcagt 428
Query: 181 gatcatctagaggctatcaagttcatctgtaaggatttttggtctgaggtctttaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gatcatctagaggctatcaagttcatctgtaaggatttttggtctgaggtctttaagaag 488
Query: 241 caagtagacaacttgaagacaaatcataggggtacctttgtattacaagataataaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 caagtagacaacttgaagacaaatcataggggtacctttgtattacaagataataaattt 548
Query: 301 ccctggctttcacggatgtcagttgatccatctgctgagaatgttagttccgttgaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ccctggctttcacggatgtcagttgatccatctgctgagaatgttagttccgttgaggat 608
Query: 361 aatacttcacctacacctgaaagcaaggcagcacaagcaatgagcatgcatctttatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aatacttcacctacacctgaaagcaaggcagcacaagcaatgagcatgcatctttatttc 668
Query: 421 ccatgtgggatcattagaggagctctttccaacttgggaattccctgtgcagtttctgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ccatgtgggatcattagaggagctctttccaacttgggaattccctgtgcagtttctgct 728
Query: 481 gatatatcaaaccttccagcatgttcatttgtggtgtgcataaaagcttga 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gatatatcaaaccttccagcatgttcatttgtggtgtgcataaaagcttga 779
>gnl|LJGI|FS328922 homologue to UniRef100_A2Q3F3 Cluster: Transport protein particle
(TRAPP) component, Bet3; n=1; Medicago truncatula|Rep:
Transport protein particle (TRAPP) component, Bet3 -
Medicago truncatula (Barrel medic), partial (87%)
Length = 746
Score = 912 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Plus
Query: 1 atggtgagggaagtgtcagagagttgcgtggatagcttgttgacggagatggtttcgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atggtgagggaagtgtcagagagttgcgtggatagcttgttgacggagatggtttcgtgc 346
Query: 61 tattgcaatcgattctacgccaacaagcctgaactcgctgctcgcaggatcgaggccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tattgcaatcgattctacgccaacaagcctgaactcgctgctcgcaggatcgaggccatt 406
Query: 121 ggataccaggtcggtcaccagctttctgaaaggtataccatggagcggcctcggttcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggataccaggtcggtcaccagctttctgaaaggtataccatggagcggcctcggttcagt 466
Query: 181 gatcatctagaggctatcaagttcatctgtaaggatttttggtctgaggtctttaagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gatcatctagaggctatcaagttcatctgtaaggatttttggtctgaggtctttaagaag 526
Query: 241 caagtagacaacttgaagacaaatcataggggtacctttgtattacaagataataaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 caagtagacaacttgaagacaaatcataggggtacctttgtattacaagataataaattt 586
Query: 301 ccctggctttcacggatgtcagttgatccatctgctgagaatgttagttccgttgaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ccctggctttcacggatgtcagttgatccatctgctgagaatgttagttccgttgaggat 646
Query: 361 aatacttcacctacacctgaaagcaaggcagcacaagcaatgagcatgcatctttatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aatacttcacctacacctgaaagcaaggcagcacaagcaatgagcatgcatctttatttc 706
Query: 421 ccatgtgggatcattagaggagctctttccaacttgggaa 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ccatgtgggatcattagaggagctctttccaacttgggaa 746
>gnl|LJGI|TC78289
Length = 561
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 498 agcatgttcatttgtggtgtgcataaaagcttga 531
|||| |||||||||||||||||||||||||||||
Sbjct: 194 agcaggttcatttgtggtgtgcataaaagcttga 227