Miyakogusa Predicted Gene
- Lj0g3v0324939.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0324939.1 Non Chatacterized Hit- tr|I3SZ76|I3SZ76_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.17,0,60S
RIBOSOMAL PROTEIN L34,Ribosomal protein L34Ae;
Ribosomal_L34e,Ribosomal protein L34Ae; RIBOSOMAL,CUFF.22094.1
(363 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61895 homologue to UniRef100_P40590 Cluster: 60S ribo... 720 0.0
gnl|LJGI|TC66740 homologue to UniRef100_P41098 Cluster: 60S ribo... 315 1e-85
gnl|LJGI|TC66834 homologue to UniRef100_Q2HVS3 Cluster: Ribosoma... 307 3e-83
gnl|LJGI|TC70780 homologue to UniRef100_Q2HVS3 Cluster: Ribosoma... 172 1e-42
gnl|LJGI|BP048046 similar to UniRef100_A9RCX9 Cluster: Predicted... 113 8e-25
>gnl|LJGI|TC61895 homologue to UniRef100_P40590 Cluster: 60S ribosomal protein L34;
n=1; Pisum sativum|Rep: 60S ribosomal protein L34 -
Pisum sativum (Garden pea), complete
Length = 719
Score = 720 bits (363), Expect = 0.0
Identities = 363/363 (100%)
Strand = Plus / Plus
Query: 1 atggtgcagcgtctcacctaccgcaggcgtcacagctacgctaccaaatccaaccagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atggtgcagcgtctcacctaccgcaggcgtcacagctacgctaccaaatccaaccagcac 115
Query: 61 cgtgttgtcaagacccccggtgggaaactcgtttatcagaccactaagaagagggccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cgtgttgtcaagacccccggtgggaaactcgtttatcagaccactaagaagagggccagt 175
Query: 121 ggacccaaatgccctgttactggcaagaggattcaagggattccacacttgaggcctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggacccaaatgccctgttactggcaagaggattcaagggattccacacttgaggcctact 235
Query: 181 gagtacaaaagatccaggttgtccagaaaccgtaggactgtgaaccgagcatatggcgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gagtacaaaagatccaggttgtccagaaaccgtaggactgtgaaccgagcatatggcgga 295
Query: 241 gttttatccggaggtgctgtcagggaaaggattattcgggctttcttggttgaagagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gttttatccggaggtgctgtcagggaaaggattattcgggctttcttggttgaagagcaa 355
Query: 301 aagattgtgaaaaaggtcttgaagattcagaaggcaaaagaaaagcttgcctctaaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aagattgtgaaaaaggtcttgaagattcagaaggcaaaagaaaagcttgcctctaaggca 415
Query: 361 tga 363
|||
Sbjct: 416 tga 418
>gnl|LJGI|TC66740 homologue to UniRef100_P41098 Cluster: 60S ribosomal protein L34;
n=1; Nicotiana tabacum|Rep: 60S ribosomal protein L34 -
Nicotiana tabacum (Common tobacco), complete
Length = 658
Score = 315 bits (159), Expect = 1e-85
Identities = 300/347 (86%)
Strand = Plus / Plus
Query: 1 atggtgcagcgtctcacctaccgcaggcgtcacagctacgctaccaaatccaaccagcac 60
||||||||| | ||||| || ||||| || ||| |||| || ||||| ||||||||||||
Sbjct: 45 atggtgcagaggctcacgtatcgcagacgccacggctatgccaccaagtccaaccagcac 104
Query: 61 cgtgttgtcaagacccccggtgggaaactcgtttatcagaccactaagaagagggccagt 120
|||||||| |||||||| ||||| || | || || ||||||||||||||||| || ||
Sbjct: 105 cgtgttgtgaagacccctggtggcaagttggtgtaccagaccactaagaagagagcaagc 164
Query: 121 ggacccaaatgccctgttactggcaagaggattcaagggattccacacttgaggcctact 180
|||||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 165 ggacccaagtgccctgttactggcaagaggatccaagggattccacatttgagacctact 224
Query: 181 gagtacaaaagatccaggttgtccagaaaccgtaggactgtgaaccgagcatatggcgga 240
|| ||||| || || |||||||| || ||||| ||||||||||||||||||||||| ||
Sbjct: 225 gaatacaagaggtctaggttgtctaggaaccgcaggactgtgaaccgagcatatggtggt 284
Query: 241 gttttatccggaggtgctgtcagggaaaggattattcgggctttcttggttgaagagcaa 300
|| ||||| ||||| ||||| || ||||||||||| || |||||| | |||||||||||
Sbjct: 285 gtattatcaggaggagctgttagagaaaggattatccgtgctttccttgttgaagagcag 344
Query: 301 aagattgtgaaaaaggtcttgaagattcagaaggcaaaagaaaagct 347
|| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 345 aaaattgtgaagaaggttttgaagattcagaaggcaaaagaaaagct 391
>gnl|LJGI|TC66834 homologue to UniRef100_Q2HVS3 Cluster: Ribosomal protein L34e; n=1;
Medicago truncatula|Rep: Ribosomal protein L34e -
Medicago truncatula (Barrel medic), complete
Length = 638
Score = 307 bits (155), Expect = 3e-83
Identities = 281/323 (86%)
Strand = Plus / Plus
Query: 1 atggtgcagcgtctcacctaccgcaggcgtcacagctacgctaccaaatccaaccagcac 60
|||||||| || |||||||| |||| ||| |||||||| || ||||||||||||||||||
Sbjct: 23 atggtgcaacgcctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcac 82
Query: 61 cgtgttgtcaagacccccggtgggaaactcgtttatcagaccactaagaagagggccagt 120
| || ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 83 agggtcgtcaaaacccccggtgggaagctcgtttaccagaccaccaagaagagggccagt 142
Query: 121 ggacccaaatgccctgttactggcaagaggattcaagggattccacacttgaggcctact 180
|||||||| |||||||| ||||| ||||||||||| ||||| || || ||||||||||
Sbjct: 143 ggacccaagtgccctgtcactggaaagaggattcaggggatcccgcatctgaggcctaca 202
Query: 181 gagtacaaaagatccaggttgtccagaaaccgtaggactgtgaaccgagcatatggcgga 240
|| ||||| ||||| ||||| ||||||| | |||||||||||||| |||||||| ||
Sbjct: 203 gaatacaagagatcaaggttacccagaaataggaggactgtgaaccgtgcatatggtggt 262
Query: 241 gttttatccggaggtgctgtcagggaaaggattattcgggctttcttggttgaagagcaa 300
|||||||| ||||| ||||| || ||||| || ||||| |||||||||||||||||||||
Sbjct: 263 gttttatctggaggagctgttagagaaagaatcattcgagctttcttggttgaagagcaa 322
Query: 301 aagattgtgaaaaaggtcttgaa 323
||||||||||||||||| |||||
Sbjct: 323 aagattgtgaaaaaggtgttgaa 345
>gnl|LJGI|TC70780 homologue to UniRef100_Q2HVS3 Cluster: Ribosomal protein L34e; n=1;
Medicago truncatula|Rep: Ribosomal protein L34e -
Medicago truncatula (Barrel medic), complete
Length = 678
Score = 172 bits (87), Expect = 1e-42
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 1 atggtgcagcgtctcacctaccgcaggcgtcacagctacgctaccaaatccaaccagcac 60
|||||||| || |||||||| |||| ||| |||||||| || ||||||||||||||||||
Sbjct: 34 atggtgcaacgcctcacctatcgcaagcggcacagctatgccaccaaatccaaccagcac 93
Query: 61 cgtgttgtcaagacccccggtgggaaactcgtttatcagaccactaagaagagggccagt 120
| || ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 94 agggtcgtcaaaacccccggtgggaagctcgtttaccagaccaccaagaagagggccagt 153
Query: 121 ggacccaaatgccctgttactggcaagaggattca 155
|||||||| |||||||| ||||| |||||||||||
Sbjct: 154 ggacccaagtgccctgtcactggaaagaggattca 188
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 170 tgaggcctactgagtacaaaagatccaggttgtccagaaaccgtaggactgtgaaccgag 229
|||||||||| || ||||| || || ||||| ||||||| | |||||||||||||| |
Sbjct: 288 tgaggcctacagaatacaagaggtcaaggttacccagaaataggaggactgtgaaccgtg 347
Query: 230 catatggcggagttttatccggaggtgctgtcagggaaaggattattcgggctttcttgg 289
||||||| || ||||||| ||||| ||||| || ||||| || ||||| ||||||||||
Sbjct: 348 catatggtggtattttatctggaggagctgttagagaaagaatcattcgagctttcttgg 407
Query: 290 ttgaagagcaaaagattgtgaaaaaggtcttgaa 323
|||||||||||||||||||||||||||| |||||
Sbjct: 408 ttgaagagcaaaagattgtgaaaaaggtgttgaa 441
>gnl|LJGI|BP048046 similar to UniRef100_A9RCX9 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(18%)
Length = 343
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 294 agagcaaaagattgtgaaaaaggtcttgaagattcagaaggcaaaagaaaagcttgcctc 353
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 256 agagccaaagattgtgaaaaaggtcttgaagattcagaaggccaaagaaaagcttgcctt 197
Query: 354 taaggcatg 362
|||||||||
Sbjct: 196 taaggcatg 188