Miyakogusa Predicted Gene
- Lj0g3v0324599.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0324599.2 Non Chatacterized Hit- tr|I0Z1V0|I0Z1V0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,35.64,6e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.22081.2
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68975 similar to UniRef100_A7Q5E7 Cluster: Chromosome... 1158 0.0
gnl|LJGI|FS359103 homologue to UniRef100_A7PR07 Cluster: Chromos... 113 1e-24
gnl|LJGI|TC75618 similar to UniRef100_A7P603 Cluster: Chromosome... 60 2e-08
>gnl|LJGI|TC68975 similar to UniRef100_A7Q5E7 Cluster: Chromosome undetermined
scaffold_53, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_53, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 1571
Score = 1158 bits (584), Expect = 0.0
Identities = 601/609 (98%)
Strand = Plus / Plus
Query: 1 atggcagagcctgatcacgtatttgtacgccctcttcccaatctggcttatggagaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 atggcagagcctgatcacgtatttgtacgccctcttcccaatctggcttatggagaaaat 793
Query: 61 ccagctgcttttccgnnnnnnnacattaggcctgatcagaatgaaaaaatcataaggaag 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ccagctgcttttccgtttttttacattaggcctgatcagaatgaaaaaatcataaggaag 853
Query: 121 tattatcctgaggagaaaggaccagtaacaaatattgatccgattggcaattctcctgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tattatcctgaggagaaaggaccagtaacaaatattgatccgattggcaattctcctgta 913
Query: 181 attatcaaaacggatgtgattgctaagattgctccgacatggatgaatgtttctttgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 attatcaaaacggatgtgattgctaagattgctccgacatggatgaatgtttctttgaag 973
Query: 241 atgaaagaggacccagagaccgataaagctttcggatgggtactagaaatgtatgcttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 atgaaagaggacccagagaccgataaagctttcggatgggtactagaaatgtatgcttat 1033
Query: 301 gcgatagcatctgccctgcatggtgtgaggcatattctgcggaaagacttcatgctacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 gcgatagcatctgccctgcatggtgtgaggcatattctgcggaaagacttcatgctacag 1093
Query: 361 cccccatgggatctcgaaactcacaataagtacataattcattatacttatgggtgtgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 cccccatgggatctcgaaactcacaataagtacataattcattatacttatgggtgtgac 1153
Query: 421 tacaatcttaagggtgaattaacttatggtaaaattggtgagtggagatttgacaaaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 tacaatcttaagggtgaattaacttatggtaaaattggtgagtggagatttgacaaaagg 1213
Query: 481 tcacatctacgaggacctccgccaagaaacttgcccttacccccaccaggggttcctgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 tcacatctacgaggacctccgccaagaaacttgcccttacccccaccaggggttcctgaa 1273
Query: 541 agtgtggtgactcttgtaaagatggtgaacgaggctactgctaacatccccaattgggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1274 agtgtggtgactcttgtaaagatggtgaacgaggctactgctaacatcccccattgggac 1333
Query: 601 actccgtaa 609
|||||||||
Sbjct: 1334 actccgtaa 1342
>gnl|LJGI|FS359103 homologue to UniRef100_A7PR07 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 729
Score = 113 bits (57), Expect = 1e-24
Identities = 135/161 (83%)
Strand = Plus / Minus
Query: 211 gctccgacatggatgaatgtttctttgaagatgaaagaggacccagagaccgataaagct 270
||||| || ||| |||||||||| |||| |||||||| || || ||||| |||||||||
Sbjct: 695 gctcccacctgggtgaatgtttcattgagaatgaaagatgatccggagacagataaagct 636
Query: 271 ttcggatgggtactagaaatgtatgcttatgcgatagcatctgccctgcatggtgtgagg 330
|| |||||||| || ||||||||||||||||| | |||||||| |||||||||| | |
Sbjct: 635 tttggatgggtgcttgaaatgtatgcttatgctgtggcatctgcattgcatggtgtaaag 576
Query: 331 catattctgcggaaagacttcatgctacagcccccatggga 371
|||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 575 catattcttcgaaaagactttatgctgcagccaccttggga 535
>gnl|LJGI|TC75618 similar to UniRef100_A7P603 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (91%)
Length = 1453
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 532 gttcctgaaagtgtggtgactcttgtaaagatggtgaacgaggctactgc 581
||||| |||||||||||||| |||||||| |||||||| || ||||||||
Sbjct: 1172 gttccagaaagtgtggtgacacttgtaaaaatggtgaatgaagctactgc 1221