Miyakogusa Predicted Gene

Lj0g3v0324309.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0324309.1 tr|C5NWK6|C5NWK6_9BACL Muramidase-released
protein OS=Gemella haemolysans ATCC 10379
GN=GEMHA0001_11,32.99,0.51,seg,NULL,CUFF.22028.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW598382                                                     143   9e-34
gnl|LJGI|AV776865                                                      62   3e-09

>gnl|LJGI|BW598382 
          Length = 486

 Score =  143 bits (72), Expect = 9e-34
 Identities = 78/80 (97%)
 Strand = Plus / Minus

                                                                       
Query: 323 cctcccttcttctggtttcgtttcctggtgttgacaagagcaaacttcttctggtttcgt 382
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 312 cctcccttcttctggtttcgtttcctggtcttgacaagagcaaacttcttctggtttcgt 253

                               
Query: 383 tccctcagaagcggggatga 402
           ||||| ||||||||||||||
Sbjct: 252 tcccttagaagcggggatga 233


>gnl|LJGI|AV776865 
          Length = 565

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 1   atgaaaatgaagagtctgggcaaagaagataaagaagag 39
           ||||| ||||||||||||||| |||||||||||||||||
Sbjct: 494 atgaagatgaagagtctgggccaagaagataaagaagag 532