Miyakogusa Predicted Gene

Lj0g3v0324209.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0324209.1 Non Chatacterized Hit- tr|D8SBN2|D8SBN2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.14,5e-18,FAMILY NOT NAMED,NULL,CUFF.22059.1
         (852 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO010528 similar to UniRef100_A7QV72 Cluster: Chromosom...  1082   0.0  

>gnl|LJGI|GO010528 similar to UniRef100_A7QV72 Cluster: Chromosome undetermined
           scaffold_186, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_186,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (50%)
          Length = 698

 Score = 1082 bits (546), Expect = 0.0
 Identities = 560/562 (99%), Gaps = 2/562 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctcataacatttgaaagatcaatcctgttcccacttctcccatcacggacatgccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 atgctcataacatttgaaagatcaatcctgttcccacttctcccatcacggacatgccag 197

                                                                       
Query: 61  gctaacacggatacaaaaacagctctcctgtggggtactaaattctcgacagccacaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gctaacacggatacaaaaacagctctcctgtggggtactaaattctcgacagccacaata 257

                                                                       
Query: 121 accatctcacccaagacacgttgtatctattgcatgtttgtccaatcgaaattgagccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 accatctcacccaagacacgttgtatctattgcatgtttgtccaatcgaaattgagccaa 317

                                                                       
Query: 181 aatgttggtgatcctgtggagaaggagaaaaaagggatgaagaaagcgggaaaggtagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aatgttggtgatcctgtggagaaggagaaaaaagggatgaagaaagcgggaaaggtagag 377

                                                                       
Query: 241 caccacttgtggaagaaacgagattcagctcagtctggccaaaaggcactcgctcttgtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caccacttgtggaagaaacgagattcagctcagtctggccaaaaggcactcgctcttgtc 437

                                                                       
Query: 301 agaactgtgtctgaactccctaatgagaaagaggctgtttatggggcattagataaatgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agaactgtgtctgaactccctaatgagaaagaggctgtttatggggcattagataaatgg 497

                                                                       
Query: 361 acggcttgggaaacagagttcccattaattgcagtagttaaggctttgaaaatcttaagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 acggcttgggaaacagagttcccattaattgcagtagttaaggctttgaaaatcttaagg 557

                                                                       
Query: 421 agaaagcgtcagtgggttcgtgtaattcaagtagcaaagtggatgttaagcaaaggtcaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agaaagcgtcagtgggttcgtgtaattcaagtagcaaagtggatgttaagcaaaggtcaa 617

                                                                       
Query: 481 ggagcaacaatgggaacatatgacacccttcttctcgcatttgatatggaccagagggtg 540
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 618 -gagcaacaatgggaacatatgacacccttcttctcgcatttgatatggaccaga-ggtg 675

                                 
Query: 541 gatgaggcagaatcattgtgga 562
           ||||||||||||||||||||||
Sbjct: 676 gatgaggcagaatcattgtgga 697