Miyakogusa Predicted Gene
- Lj0g3v0324189.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0324189.2 tr|H8WVC7|H8WVC7_LOTJA E3 ubiquitin ligase-like
protein (Fragment) OS=Lotus japonicus GN=SINA5 PE=2 ,100,0,SEVEN IN
ABSENTIA HOMOLOG,Seven-in-absentia protein, sina; TRAF
domain-like,TRAF-like; ZF_SIAH,Zinc ,CUFF.22053.2
(507 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP053570 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n... 349 1e-95
gnl|LJGI|TC62546 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=... 337 4e-92
gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n... 54 9e-07
gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n... 54 9e-07
>gnl|LJGI|BP053570 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=1; Vitis
vinifera|Rep: SINA2p - Vitis vinifera (Grape), partial
(23%)
Length = 448
Score = 349 bits (176), Expect = 1e-95
Identities = 200/208 (96%)
Strand = Plus / Minus
Query: 300 gggtgaagacaatgaggcaagtaaatttaggttcactttggaagttggtgcaaatagccg 359
|||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 448 gggtgaagaccatgaggccagtaaatttaggttcactttggaagttggtgccaatagccg 389
Query: 360 taaacttatatggcaaggaattccaaggagcattcgcaatagtcatagaaaggttcgtga 419
|||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 388 taaacttatatggccaggaattcccaggagcattcgccatagtcatagaaaggttcgtga 329
Query: 420 ttgtcaagatggactcatcattccgaggcacttagctctttatttttctagtggggacaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttgtcaagatggactcatcattccgaggcacttagctctttatttttctagtggggacaa 269
Query: 480 gcaacaattgaagttcaagatcactggt 507
|| || ||||||||||||||||||||||
Sbjct: 268 gccaccattgaagttcaagatcactggt 241
>gnl|LJGI|TC62546 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=1; Vitis vinifera|Rep:
SINA2p - Vitis vinifera (Grape), partial (89%)
Length = 1323
Score = 337 bits (170), Expect = 4e-92
Identities = 398/474 (83%)
Strand = Plus / Plus
Query: 3 gcttaagcatgagcaaaattgtcggtttcgtccgtacaagtgtccctatgctggatcaga 62
||||||||||||||| | |||| | |||||||| ||||| || || ||||||||||| ||
Sbjct: 650 gcttaagcatgagcagagttgtggatttcgtccatacaattgcccatatgctggatctga 709
Query: 63 gtgctctgtcatgggtgacattccaactctcttggtccatctcaagattgatcacaaggt 122
||||||||| ||||||||| |||| |||||| | | |||||| ||| ||||||||||||
Sbjct: 710 gtgctctgtgatgggtgaccttcctactctccttgcccatctaaaggatgatcacaaggt 769
Query: 123 tgacgtgcatgatggatgcacctttaaccatcgatatgtcaaatcaaatccacatgaagt 182
|||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 770 tgacatgcatgatggatgcaccttcaatcatcgatatgtcaaatcaaatccacatgaagt 829
Query: 183 tgaaaacgccatatggatgctaactgtttttaattgttttgaaaggtatttctgcttgca 242
||| || |||| ||||||||||||| |||||||| |||||| || | |||||||||||
Sbjct: 830 tgagaatgccacatggatgctaactatttttaatagttttgggagacacttctgcttgca 889
Query: 243 ctttgaggcatttttgctaggaaaagctccagtttatatagcctttttacgatttttggg 302
|||||||||||| | | || | |||||||||||| || |||||||| || ||||||||
Sbjct: 890 ctttgaggcattccagattggcacagctccagtttacatggcctttttgcggtttttggg 949
Query: 303 tgaagacaatgaggcaagtaaatttaggttcactttggaagttggtgcaaatagccgtaa 362
||| |||| ||| |||| ||||| || | || ||||||||||| |||||| |||| ||
Sbjct: 950 tgaggacagtgaagcaaagaaattcagctacagcttggaagttggcgcaaatggccgcaa 1009
Query: 363 acttatatggcaaggaattccaaggagcattcgcaatagtcatagaaaggttcgtgattg 422
|||| ||||||||||||||| ||||||||||| | |||||| | || ||||| ||| |
Sbjct: 1010 gcttacatggcaaggaattccgaggagcattcgtgacagtcatcggaaagttcgagatag 1069
Query: 423 tcaagatggactcatcattccgaggcacttagctctttatttttctagtgggga 476
||||||||| || || |||| |||| || | | |||||||||||| |||||||
Sbjct: 1070 tcaagatggtcttataattcagaggaaccttggcctttatttttctggtgggga 1123
>gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n=1; Medicago
truncatula|Rep: SINA5 - Medicago truncatula (Barrel
medic), partial (54%)
Length = 678
Score = 54.0 bits (27), Expect = 9e-07
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 135 tggatgcacctttaaccatcgatatgtcaaatcaaatccacat-gaagttgaaaacgcca 193
||||||||| ||||||||||| |||||||| || ||||| ||| ||||| ||||| || |
Sbjct: 68 tggatgcacttttaaccatcgttatgtcaagtccaatcc-catggaagtagaaaatgcta 126
Query: 194 tatggatgctaactgtttt 212
|||||||||||| |||||
Sbjct: 127 catggatgctaacggtttt 145
>gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n=1; Medicago
truncatula|Rep: SINA2 - Medicago truncatula (Barrel
medic), partial (89%)
Length = 1460
Score = 54.0 bits (27), Expect = 9e-07
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 135 tggatgcacctttaaccatcgatatgtcaaatcaaatccacat-gaagttgaaaacgcca 193
||||||||| ||||||||||| |||||||| || ||||| ||| ||||| ||||| || |
Sbjct: 848 tggatgcacttttaaccatcgttatgtcaagtccaatcc-catggaagtagaaaatgcta 906
Query: 194 tatggatgctaactgtttt 212
|||||||||||| |||||
Sbjct: 907 catggatgctaacggtttt 925