Miyakogusa Predicted Gene
- Lj0g3v0324189.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0324189.1 tr|H8WVC7|H8WVC7_LOTJA E3 ubiquitin ligase-like
protein (Fragment) OS=Lotus japonicus GN=SINA5 PE=2 ,99.65,0,SEVEN IN
ABSENTIA HOMOLOG,NULL; SEVEN IN ABSENTIA HOMOLOG,Seven-in-absentia
protein, sina; TRAF doma,CUFF.22053.1
(858 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62546 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=... 541 e-153
gnl|LJGI|BP053570 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n... 391 e-108
gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n... 56 4e-07
gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n... 54 1e-06
gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n... 54 1e-06
>gnl|LJGI|TC62546 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=1; Vitis vinifera|Rep:
SINA2p - Vitis vinifera (Grape), partial (89%)
Length = 1323
Score = 541 bits (273), Expect = e-153
Identities = 645/769 (83%)
Strand = Plus / Plus
Query: 38 caaaatctagggttgcgttggatggaaagattggcattaattcgaagaatgatgtctatg 97
|||||||||| |||| || | |||||||| || |||| ||| ||||||| || ||||
Sbjct: 355 caaaatctagtgttgggtcgactggaaagaatgaaattagttcaaagaatggcgtgtatg 414
Query: 98 acttacttaagtgccctgtttgcacaaatttgatgtatccaccaattcatcagtgcccta 157
||||||| ||||| ||||| |||| |||||||||||||| |||||||| |||||||| |
Sbjct: 415 acttactcaagtgtcctgtctgcaagaatttgatgtatcccccaattcaccagtgcccaa 474
Query: 158 atggccatacattatgttcaaattgtaagatttctatgcataactgttgcccaacatgct 217
||||||||||||||||||| |||||||||||| | ||||| |||||||| |||
Sbjct: 475 atggccatacattatgttccaattgtaagattgaagtccataatatctgcccaacctgcg 534
Query: 218 tctgtgatcttgggaatataaggtgtttggctctagagaaagtagctgaatcgttggagc 277
| |||||||| ||||||||||||||||||| | |||||||| || ||||| |||||||
Sbjct: 535 accatgatcttgagaatataaggtgtttggctttggagaaagtggcagaatctttggagc 594
Query: 278 ttccttgcagaaatcagagtctaggttgtcatgatgtattcccatactacactatgctta 337
||||||||| | ||||||| ||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 595 ttccttgcaaatatcagagcctaggttgtcatgatatattcccatactatactaagctta 654
Query: 338 agcatgagcaaaattgtcggtttcgtccgtacaagtgtccctatgctggatcagagtgct 397
|||||||||| | |||| | |||||||| ||||| || || ||||||||||| |||||||
Sbjct: 655 agcatgagcagagttgtggatttcgtccatacaattgcccatatgctggatctgagtgct 714
Query: 398 ctgtcatgggtgacattccaactctcttggtccatctcaagattgatcacaaggttgacg 457
|||| ||||||||| |||| |||||| | | |||||| ||| ||||||||||||||||
Sbjct: 715 ctgtgatgggtgaccttcctactctccttgcccatctaaaggatgatcacaaggttgaca 774
Query: 458 tgcatgatggatgcacctttaaccatcgatatgtcaaatcaaatccacatgaagttgaaa 517
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 775 tgcatgatggatgcaccttcaatcatcgatatgtcaaatcaaatccacatgaagttgaga 834
Query: 518 acgccatatggatgctaactgtttttaattgttttgaaaggtatttctgcttgcactttg 577
| |||| ||||||||||||| |||||||| |||||| || | ||||||||||||||||
Sbjct: 835 atgccacatggatgctaactatttttaatagttttgggagacacttctgcttgcactttg 894
Query: 578 aggcatttttgctaggaaaagctccagtttatatagcctttttacgatttttgggtgaag 637
||||||| | | || | |||||||||||| || |||||||| || ||||||||||| |
Sbjct: 895 aggcattccagattggcacagctccagtttacatggcctttttgcggtttttgggtgagg 954
Query: 638 acaatgaggcaagtaaatttaggttcactttggaagttggtgcaaatagccgtaaactta 697
||| ||| |||| ||||| || | || ||||||||||| |||||| |||| || ||||
Sbjct: 955 acagtgaagcaaagaaattcagctacagcttggaagttggcgcaaatggccgcaagctta 1014
Query: 698 tatggcaaggaattccaaggagcattcgcaatagtcatagaaaggttcgtgattgtcaag 757
||||||||||||||| ||||||||||| | |||||| | || ||||| ||| ||||||
Sbjct: 1015 catggcaaggaattccgaggagcattcgtgacagtcatcggaaagttcgagatagtcaag 1074
Query: 758 atggactcatcattccgaggcacttagctctttatttttctagtgggga 806
|||| || || |||| |||| || | | |||||||||||| |||||||
Sbjct: 1075 atggtcttataattcagaggaaccttggcctttatttttctggtgggga 1123
>gnl|LJGI|BP053570 similar to UniRef100_Q9XGC3 Cluster: SINA2p; n=1; Vitis
vinifera|Rep: SINA2p - Vitis vinifera (Grape), partial
(23%)
Length = 448
Score = 391 bits (197), Expect = e-108
Identities = 221/229 (96%)
Strand = Plus / Minus
Query: 630 gggtgaagacaatgaggcaagtaaatttaggttcactttggaagttggtgcaaatagccg 689
|||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 448 gggtgaagaccatgaggccagtaaatttaggttcactttggaagttggtgccaatagccg 389
Query: 690 taaacttatatggcaaggaattccaaggagcattcgcaatagtcatagaaaggttcgtga 749
|||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 388 taaacttatatggccaggaattcccaggagcattcgccatagtcatagaaaggttcgtga 329
Query: 750 ttgtcaagatggactcatcattccgaggcacttagctctttatttttctagtggggacaa 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttgtcaagatggactcatcattccgaggcacttagctctttatttttctagtggggacaa 269
Query: 810 gcaacaattgaagttcaagatcactggtcatatttggaaagacgaatga 858
|| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gccaccattgaagttcaagatcactggtcatatttggaaagacgaatga 220
>gnl|LJGI|TC68066 homologue to UniRef100_A8W463 Cluster: SINA4; n=1; Medicago
truncatula|Rep: SINA4 - Medicago truncatula (Barrel
medic), complete
Length = 1635
Score = 56.0 bits (28), Expect = 4e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 109 tgccctgtttgcacaaatttgatgtatccaccaattcatcagtgccctaatggccataca 168
|||||||| || || |||| ||||| ||||||||||||||||||| |||||||| |||
Sbjct: 523 tgccctgtatgtaccaattcaatgtacccaccaattcatcagtgccacaatggccacaca 582
Query: 169 ttatgttc 176
|| |||||
Sbjct: 583 ttgtgttc 590
>gnl|LJGI|TC69704 homologue to UniRef100_A8W464 Cluster: SINA5; n=1; Medicago
truncatula|Rep: SINA5 - Medicago truncatula (Barrel
medic), partial (54%)
Length = 678
Score = 54.0 bits (27), Expect = 1e-06
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 465 tggatgcacctttaaccatcgatatgtcaaatcaaatccacat-gaagttgaaaacgcca 523
||||||||| ||||||||||| |||||||| || ||||| ||| ||||| ||||| || |
Sbjct: 68 tggatgcacttttaaccatcgttatgtcaagtccaatcc-catggaagtagaaaatgcta 126
Query: 524 tatggatgctaactgtttt 542
|||||||||||| |||||
Sbjct: 127 catggatgctaacggtttt 145
>gnl|LJGI|TC66464 homologue to UniRef100_A8W461 Cluster: SINA2; n=1; Medicago
truncatula|Rep: SINA2 - Medicago truncatula (Barrel
medic), partial (89%)
Length = 1460
Score = 54.0 bits (27), Expect = 1e-06
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 465 tggatgcacctttaaccatcgatatgtcaaatcaaatccacat-gaagttgaaaacgcca 523
||||||||| ||||||||||| |||||||| || ||||| ||| ||||| ||||| || |
Sbjct: 848 tggatgcacttttaaccatcgttatgtcaagtccaatcc-catggaagtagaaaatgcta 906
Query: 524 tatggatgctaactgtttt 542
|||||||||||| |||||
Sbjct: 907 catggatgctaacggtttt 925