Miyakogusa Predicted Gene

Lj0g3v0323599.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0323599.1 tr|G7JGG5|G7JGG5_MEDTR Ferredoxin-6 OS=Medicago
truncatula GN=MTR_4g098490 PE=2 SV=1,79.79,0,2Fe-2S
ferredoxin-like,2Fe-2S ferredoxin-type domain; Fer2,2Fe-2S
ferredoxin-type domain; fdx_plant:,CUFF.21981.1
         (558 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66629 similar to UniRef100_A9SNM1 Cluster: Predicted ...   787   0.0  

>gnl|LJGI|TC66629 similar to UniRef100_A9SNM1 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (65%)
          Length = 764

 Score =  787 bits (397), Expect = 0.0
 Identities = 397/397 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcactctccttccttcgaatccccggtaactgctgcattccatacaccaacctgcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19  atggcactctccttccttcgaatccccggtaactgctgcattccatacaccaacctgcaa 78

                                                                       
Query: 61  cctttcccttccaaaaatatcctccgcaagaccacggtggtggcggcggcggcggagctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  cctttcccttccaaaaatatcctccgcaagaccacggtggtggcggcggcggcggagctc 138

                                                                       
Query: 121 caagcgccgatggggctggcgggtggaaccgattacgagtttccaggtggtaatgttcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 caagcgccgatggggctggcgggtggaaccgattacgagtttccaggtggtaatgttcca 198

                                                                       
Query: 181 acccataaggttacagtccacgatagacaacgaggagttgttcacgagttctcagtgcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 acccataaggttacagtccacgatagacaacgaggagttgttcacgagttctcagtgcct 258

                                                                       
Query: 241 gaggaccagtatatattacatactgctgaatcccagaacattaaccttccattcgcctgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gaggaccagtatatattacatactgctgaatcccagaacattaaccttccattcgcctgc 318

                                                                       
Query: 301 aggcatggttgttgtactagctgtgctgtgcggatcaagaatggacagattaaacagcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aggcatggttgttgtactagctgtgctgtgcggatcaagaatggacagattaaacagcca 378

                                                
Query: 361 caggcacttgggatatctgccgagttgagagagaagg 397
           |||||||||||||||||||||||||||||||||||||
Sbjct: 379 caggcacttgggatatctgccgagttgagagagaagg 415



 Score =  188 bits (95), Expect = 3e-47
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                       
Query: 464 aggtatattggcttcaatttggacgttattttgcccgaggaccggtggaaagagatgact 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aggtatattggcttcaatttggacgttattttgcccgaggaccggtggaaagagatgact 472

                                              
Query: 524 atgccttggagttggccatgggtgacgagtgagta 558
           |||||||||||||||||||||||||||||||||||
Sbjct: 473 atgccttggagttggccatgggtgacgagtgagta 507