Miyakogusa Predicted Gene

Lj0g3v0323479.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0323479.1 Non Chatacterized Hit- tr|I1L0E1|I1L0E1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36294 PE,87.35,0,DNA/RNA
polymerases,NULL; seg,NULL; RVT_1,Reverse transcriptase;
Intron_maturas2,Domain X; PREDICTED,CUFF.21963.1
         (1972 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS341388 similar to UniRef100_A7QCE9 Cluster: Chromosom...   779   0.0  

>gnl|LJGI|FS341388 similar to UniRef100_A7QCE9 Cluster: Chromosome undetermined
           scaffold_77, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_77, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (22%)
          Length = 628

 Score =  779 bits (393), Expect = 0.0
 Identities = 399/401 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggatcgacaacttccgccaccccgacagagtcgtcaccaacctctcctcctccctc 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 228 atgtggatcgacaacttccgccacccagacagagtcgtcaccaacctctcctcctccctc 287

                                                                       
Query: 61  cgccgcttcgagctctggctcctcgcctaccagaaagtcctcaccgacgaaaccggcgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cgccgcttcgagctctggctcctcgcctaccagaaagtcctcaccgacgaaaccggcgcc 347

                                                                       
Query: 121 tacaccccacgcagcaccatccccaggtcccagcttgaggaccttctcgccctccgcaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tacaccccacgcagcaccatccccaggtcccagcttgaggaccttctcgccctccgcaat 407

                                                                       
Query: 181 gccgttctcgatggaaacttcaagtggggtgccaggctcaagttccatatcaagtccccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gccgttctcgatggaaacttcaagtggggtgccaggctcaagttccatatcaagtccccc 467

                                                                       
Query: 241 aaggacaaaaccgattacgattcgctctcgaagaggaagattaagatcatcctcaccacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aaggacaaaaccgattacgattcgctctcgaagaggaagattaagatcatcctcaccacc 527

                                                                       
Query: 301 acacaacctgcaccatttcaagataaaatagttcaggaggttttgttgatgatccttgag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 acacaacctgcaccatttcaagataaaatagttcaggaggttttgttgatgatccttgag 587

                                                    
Query: 361 cctatttatgaggctcggttttcgtcgaagtcctttgcgtt 401
           ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 588 cctatttatgaggctcggttttcgtcgaaatcctttgcgtt 628