Miyakogusa Predicted Gene
- Lj0g3v0323229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0323229.1 Non Chatacterized Hit- tr|I1KTT0|I1KTT0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.88,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; DYW_de,CUFF.22002.1
(2053 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosom... 1211 0.0
gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chr... 547 e-155
gnl|LJGI|TC74035 similar to UniRef100_A7PHH0 Cluster: Chromosome... 385 e-106
gnl|LJGI|FS343712 145 1e-33
gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9... 113 4e-24
>gnl|LJGI|FS325460 similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 741
Score = 1211 bits (611), Expect = 0.0
Identities = 611/611 (100%)
Strand = Plus / Plus
Query: 1 atggagattccactctccagttaccagaccttatcactggaccaattccaagacaggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atggagattccactctccagttaccagaccttatcactggaccaattccaagacaggtct 190
Query: 61 tgttttacctcaaacatgaggaattggagctaccctttcccccggattcgttgttcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgttttacctcaaacatgaggaattggagctaccctttcccccggattcgttgttcctct 250
Query: 121 tccatggaacaagggctgaggccaaaacccaagaaaactgagtatgtggatagaaaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tccatggaacaagggctgaggccaaaacccaagaaaactgagtatgtggatagaaaaatg 310
Query: 181 ccagttttggatgatgcccagatcatgaaaccatccactcctggactctgtagtcagata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ccagttttggatgatgcccagatcatgaaaccatccactcctggactctgtagtcagata 370
Query: 241 gagaagttgggtttgtgtaataggcatagggaggcaatggagctgtttgaaattttggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gagaagttgggtttgtgtaataggcatagggaggcaatggagctgtttgaaattttggaa 430
Query: 301 cttgaaggtgactgtgctgatgtgggtgctagcacatatgatgctttggtgaatgtttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cttgaaggtgactgtgctgatgtgggtgctagcacatatgatgctttggtgaatgtttgt 490
Query: 361 gttggtttgagatcgattagaggtgttaagaaggtgttcaattatatgattagtagtggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gttggtttgagatcgattagaggtgttaagaaggtgttcaattatatgattagtagtggg 550
Query: 421 tttgagcctgatttgtatatgatgaacagggttttgcttatgcatgtgaaatgtggtctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tttgagcctgatttgtatatgatgaacagggttttgcttatgcatgtgaaatgtggtctc 610
Query: 481 atgctcgatgcgcgcaagctgtttggtgatatgcctgagagagatgtggtttcgtggatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 atgctcgatgcgcgcaagctgtttggtgatatgcctgagagagatgtggtttcgtggatg 670
Query: 541 accgtgattggcggacttgtggattccggggattactctgaagctttcgggttgtttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 accgtgattggcggacttgtggattccggggattactctgaagctttcgggttgtttttg 730
Query: 601 ttcatgtgggt 611
|||||||||||
Sbjct: 731 ttcatgtgggt 741
>gnl|LJGI|TC78293 weakly similar to UniRef100_A7PHH0 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 1047
Score = 547 bits (276), Expect = e-155
Identities = 520/600 (86%), Gaps = 1/600 (0%)
Strand = Plus / Plus
Query: 61 tgttttacctcaaacatgaggaattggagctaccctttcccccggattcgttgttcctct 120
|||||| ||||||| |||| || ||||||||||| || | | |||||||||||| |||
Sbjct: 270 tgttttgcctcaaaggtgagaaactggagctacccatttcgtcagattcgttgttcatct 329
Query: 121 tccatggaacaagggctgaggccaaaacccaagaaaactgagtatgtggatagaaaaatg 180
||||||||||||||| ||||||| || | ||||||| || | ||||||| |||||||||
Sbjct: 330 tccatggaacaagggttgaggcccaagcgaaagaaaattgggcatgtggagagaaaaatg 389
Query: 181 ccagttttggatgatgcccagatcatgaaaccatccactcctggactctgtagtcagata 240
| | |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct: 390 tcgggtttggatgatgcccaggtcatgaaaccatccacttctgggctctgtagtcagatt 449
Query: 241 gagaagttgggtttgtgtaataggcatagggaggcaatggagctgtttgaaattttgg-a 299
|||||||||| |||||||| |||| | | || |||||||| |||||||||||||||| |
Sbjct: 450 gagaagttggctttgtgtactaggtacaaagacgcaatggacctgtttgaaattttggga 509
Query: 300 acttgaaggtgactgtgctgatgtgggtgctagcacatatgatgctttggtgaatgtttg 359
|||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||
Sbjct: 510 acttgaaggtgatggtgctgatgtgggtggtagcaattataatgctttggtgaatgtttg 569
Query: 360 tgttggtttgagatcgattagaggtgttaagaaggtgttcaattatatgattagtagtgg 419
||||||||||||||| |||||||| ||||||| |||||| |||||||||||||||| |||
Sbjct: 570 tgttggtttgagatcaattagaggggttaagagggtgtttaattatatgattagtaatgg 629
Query: 420 gtttgagcctgatttgtatatgatgaacagggttttgcttatgcatgtgaaatgtggtct 479
||||||||||||| ||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 630 gtttgagcctgatctgtatatgatgaacaaggttttgcatatgcatgtgagatgtggtct 689
Query: 480 catgctcgatgcgcgcaagctgtttggtgatatgcctgagagagatgtggtttcgtggat 539
|||||| ||||| ||||||||||||| | |||| ||||||||| | |||||| |||||
Sbjct: 690 catgcttgatgcacgcaagctgtttgctaatatttttgagagagacgcggtttcctggat 749
Query: 540 gaccgtgattggcggacttgtggattccggggattactctgaagctttcgggttgttttt 599
|||| |||| || ||||||||||| || ||| |||| ||||||||| | | ||||||
Sbjct: 750 gaccttgatcggtggacttgtggactctgggaattatgttgaagcttttgagcagttttt 809
Query: 600 gttcatgtgggtggagtttaatgatggcaggtctcgtacttttgccaccatggttcgggc 659
|| |||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||
Sbjct: 810 gtgcatgtgggaagagtttaatgacggcaggtctcgcacttttgccaccatggtttgggc 869
Score = 111 bits (56), Expect = 2e-23
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 1002 tcatgctgcattagttcgtcatggttttggctcggatatagtggcaaacacagcgcttgt 1061
||||| ||| ||||||||| |||||||||||| ||||| ||| ||||||||| ||||||
Sbjct: 871 tcatgttgcgttagttcgttatggttttggcttagatattgtgacaaacacagggcttgt 930
Query: 1062 tgacttctatagcaaatggggtaggatg 1089
||||||||||||||||||||||||||||
Sbjct: 931 tgacttctatagcaaatggggtaggatg 958
Score = 61.9 bits (31), Expect = 1e-08
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 4 gagattccactctccagttaccagaccttatcactggaccaattccaagac 54
|||||| |||||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 168 gagattacactctcccattaccagaccttatcacgggatcaattccaagac 218
>gnl|LJGI|TC74035 similar to UniRef100_A7PHH0 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 556
Score = 385 bits (194), Expect = e-106
Identities = 272/298 (91%)
Strand = Plus / Plus
Query: 1756 gatgagatatcaaggcatggttacattaaggagaatgaaatgctgcttcctgatgtggat 1815
||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 19 gatgagatatcaaggcatggttacattgaggagcatgaaatgttgcttcctgatgtggat 78
Query: 1816 gaagaggaacagcgccttcaacaataccatagcgaaaagctggcaatagctttcggtctt 1875
||||||||||| ||| ||| | |||||||||| |||| ||||| |||||||| ||||||
Sbjct: 79 gaagaggaacaacgcattctaaaataccatagtgaaatgctgggaatagcttatggtctt 138
Query: 1876 atcaacactccagattggacacctttgcagattactcaaggacatcgcgtatgcggggat 1935
||||||||||| |||||||||||||| || || ||||| || ||||| ||||| ||| ||
Sbjct: 139 atcaacactcctgattggacacctttacaaataactcagggccatcgtgtatgtgggaat 198
Query: 1936 tgccataatgcaatcaaacttatagccatggtcacaggacgagagattgtggtgagagat 1995
|||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 199 tgccataatgcaatcaaacttatagccatggttacaggacgggagattgtggtaagagat 258
Query: 1996 gctagtagatttcaccattttagaaatgcgacttgttcttgtggcgattattggtgat 2053
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 259 gctagtagatttcaccattttagaaatgggacatgttcttgtggcgattattggtgat 316
>gnl|LJGI|FS343712
Length = 438
Score = 145 bits (73), Expect = 1e-33
Identities = 136/157 (86%)
Strand = Plus / Plus
Query: 83 attggagctaccctttcccccggattcgttgttcctcttccatggaacaagggctgaggc 142
||||||||||||| || ||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct: 280 attggagctacccattttcccagattcgttgttcctcttccatggaacatgggttgaggc 339
Query: 143 caaaacccaagaaaactgagtatgtggatagaaaaatgccagttttggatgatgcccaga 202
| || || ||||||| || | ||||||| || ||| | ||||||||||| ||||||||
Sbjct: 340 ccaagcctaagaaaattgggcatgtggagaggaaagttccagttttggaggatgcccatg 399
Query: 203 tcatgaaaccatccactcctggactctgtagtcagat 239
||||||||||||||||| |||| ||||||||||||||
Sbjct: 400 tcatgaaaccatccacttctgggctctgtagtcagat 436
>gnl|LJGI|GO036292 weakly similar to UniRef100_Q9LP03 Cluster: F9C16.15; n=1;
Arabidopsis thaliana|Rep: F9C16.15 - Arabidopsis
thaliana (Mouse-ear cress), partial (3%)
Length = 651
Score = 113 bits (57), Expect = 4e-24
Identities = 108/125 (86%)
Strand = Plus / Plus
Query: 438 tatgatgaacagggttttgcttatgcatgtgaaatgtggtctcatgctcgatgcgcgcaa 497
||||| ||||| | |||||||||| ||||| | || |||||||||||| ||||| | |||
Sbjct: 446 tatgaggaacatgattttgcttatacatgtcagatatggtctcatgcttgatgcacacaa 505
Query: 498 gctgtttggtgatatgcctgagagagatgtggtttcgtggatgaccgtgattggcggact 557
| |||||| |||||| ||| |||||||||||||||| |||||||||||||| || |||||
Sbjct: 506 gttgtttgatgatattccttagagagatgtggtttcctggatgaccgtgatgggtggact 565
Query: 558 tgtgg 562
|||||
Sbjct: 566 tgtgg 570