Miyakogusa Predicted Gene

Lj0g3v0322979.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0322979.1 Non Chatacterized Hit- tr|K3Y967|K3Y967_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si010731,83.33,0.000007,seg,NULL; coiled-coil,NULL,CUFF.21923.1
         (579 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73163 similar to UniRef100_A7P1K4 Cluster: Chromosome...   654   0.0  

>gnl|LJGI|TC73163 similar to UniRef100_A7P1K4 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 816

 Score =  654 bits (330), Expect = 0.0
 Identities = 330/330 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagaccgaaacggaaacggtgctctgccgaataaggctgcagcgagcttggagaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67  atgtcagaccgaaacggaaacggtgctctgccgaataaggctgcagcgagcttggagaaa 126

                                                                       
Query: 61  cccgaaggtgatgatgctccgtccagaatagattccaggaaagcccgagaaaattccgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cccgaaggtgatgatgctccgtccagaatagattccaggaaagcccgagaaaattccgac 186

                                                                       
Query: 121 gtagactcggaaaccgagagaaagcacagcaattcgaggaggatgaaagcgcgagaaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gtagactcggaaaccgagagaaagcacagcaattcgaggaggatgaaagcgcgagaaagc 246

                                                                       
Query: 181 tcagactactttgaagatgagaaaccacgcagcaggaagaggaaatcatcgcggaggcgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcagactactttgaagatgagaaaccacgcagcaggaagaggaaatcatcgcggaggcgc 306

                                                                       
Query: 241 tacagcagcgattgggatgattcggagttaggttcagattcggaggacgatgagtccgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tacagcagcgattgggatgattcggagttaggttcagattcggaggacgatgagtccgag 366

                                         
Query: 301 cggtctagttcggattctgaatcggaatct 330
           ||||||||||||||||||||||||||||||
Sbjct: 367 cggtctagttcggattctgaatcggaatct 396



 Score =  105 bits (53), Expect = 3e-22
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                                
Query: 524 cagtcacaaattcatggggaaagtatggtgttattagagaaactgatatgtgg 576
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cagtcacaaattcatggggaaagtatggtgttattagagaaactgatatgtgg 642