Miyakogusa Predicted Gene
- Lj0g3v0322939.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0322939.2 tr|G7JHV9|G7JHV9_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_4g118380 PE=4 SV=1,50.91,0.00009,F_box_assoc_1:
F-box protein interaction domain,F-box associated interaction domain;
no description,,CUFF.21924.2
(1562 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325267 420 e-116
gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 100 5e-20
gnl|LJGI|GO023363 weakly similar to UniRef100_A7Q9Q0 Cluster: Ch... 66 7e-10
gnl|LJGI|TC74845 weakly similar to UniRef100_Q70WR3 Cluster: S l... 60 4e-08
gnl|LJGI|TC63103 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 58 2e-07
gnl|LJGI|TC78685 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 54 3e-06
gnl|LJGI|TC73974 weakly similar to UniRef100_A7Q9Q0 Cluster: Chr... 54 3e-06
>gnl|LJGI|FS325267
Length = 643
Score = 420 bits (212), Expect = e-116
Identities = 394/454 (86%), Gaps = 3/454 (0%)
Strand = Plus / Plus
Query: 125 tgatcgtcgaaattctgcttcgcctgccggtaagatctctacggcgttttaaaaaggttt 184
||||||| |||||||||||||| || ||||| |||||||||| || ||| || |||||
Sbjct: 190 tgatcgttgaaattctgcttcggctaccggtgagatctctactacgctttcgaagggttt 249
Query: 185 ctccgtcatggtcctct---attatttccgatccccaattcaagaaatcccattttgacc 241
| ||||||||||||| |||||||||||| |||| ||| ||||||||||||||||
Sbjct: 250 gtaagtcatggtcctctctcattatttccgatacccatttcgcaaaatcccattttgacc 309
Query: 242 taaatgctgcacccactgatcgtcttcttcttcgatttctcgatgaggatagagacatag 301
| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct: 310 tgaatgctgcacccactgatcgtcttcttcttcgatttctcgatgaggatagcggtagag 369
Query: 302 ttcaatcctttgatctagcttcatcgcttgatgaccgttctgctatcaaaaccctcaatg 361
||||||||||||||||||||||||| ||| |||||||||| || |||||||||||| ||
Sbjct: 370 ttcaatcctttgatctagcttcatcacttcatgaccgttcaactgtcaaaaccctcagtg 429
Query: 362 tcccacctccatccatgttgtgtaatcacaaccctttatatttcttgggttcttgcaggg 421
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 430 tcccacctccatccatgttgtgtaatcacaaccctttgtatttcttaggttcatgcaggg 489
Query: 422 gttttatgcttttagcctatgaacatactggtgatctcattgtttggaatccaacaaccg 481
| |||||||||||||||||| | || | | |||| ||||||| ||||||||||||||||
Sbjct: 490 ggtttatgcttttagcctatcagcaaagcgatgatatcattgtgtggaatccaacaaccg 549
Query: 482 gtttcgatcaacaaattctggatatagaccatgagtttgtgtttaagtttctatgtggtt 541
||||| |||||||| ||| ||||||||| |||| || ||||| |||| ||| ||| |
Sbjct: 550 gtttccatcaacaacttccagatatagactatgatttcatgtttctgtttatatctgggt 609
Query: 542 ttgggtatgacagctcaactgatgactattttgt 575
||||||||||||| ||| |||||||||| |||||
Sbjct: 610 ttgggtatgacagatcatctgatgactactttgt 643
>gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 681
Score = 99.6 bits (50), Expect = 5e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 205 atttccgatccccaattcaagaaatcccattttgacctaaatgctgcacccactgatcgt 264
||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 141 atttctgatccccaatttgctaaatcccattttgacctaaatgctgcacccactcatcgt 200
Query: 265 cttcttcttcgatttctc 282
||||||||||||| ||||
Sbjct: 201 cttcttcttcgatgtctc 218
Score = 99.6 bits (50), Expect = 5e-20
Identities = 83/94 (88%)
Strand = Plus / Plus
Query: 351 aaccctcaatgtcccacctccatccatgttgtgtaatcacaaccctttatatttcttggg 410
|||||||||| | || ||||||| ||||| |||| ||| ||| ||||||||||||||||
Sbjct: 257 aaccctcaatcttccgcctccatgcatgtcttgtattcagaactctttatatttcttggg 316
Query: 411 ttcttgcaggggttttatgcttttagcctatgaa 444
|||||||||||| ||||||||||||||| |||||
Sbjct: 317 ttcttgcagggggtttatgcttttagccaatgaa 350
Score = 65.9 bits (33), Expect = 7e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 537 tggttttgggtatgacagctcaactgatgactattttgtagttgttata 585
||||||||||||||||| |||||| |||||||||||| ||||| |||||
Sbjct: 437 tggttttgggtatgacaactcaaccgatgactattttctagttcttata 485
Score = 61.9 bits (31), Expect = 1e-08
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 708 tggggtgttcttgaatgactctcttcattggctggtcatttatatggagacaaggcttcc 767
||||||||||||||| ||||||||||||||||||| |||| || || ||||| ||||
Sbjct: 596 tggggtgttcttgaacaactctcttcattggctggttatttctaaggttacaagtcttca 655
Query: 768 tgtagttattg 778
||||||||||
Sbjct: 656 agtagttattg 666
>gnl|LJGI|GO023363 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 622
Score = 65.9 bits (33), Expect = 7e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 205 atttccgatccccaattcaagaaatcccattttgacctaaatgctgcacccac 257
|||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 188 atttccgatccccaattctgcaaatcccattttgacctagctgctgcacccac 240
>gnl|LJGI|TC74845 weakly similar to UniRef100_Q70WR3 Cluster: S locus F-box (SLF)-S1E
protein; n=1; Antirrhinum hispanicum|Rep: S locus F-box
(SLF)-S1E protein - Antirrhinum hispanicum (Snapdragon),
partial (5%)
Length = 888
Score = 60.0 bits (30), Expect = 4e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 926 gtgagatatgggtcatgaaaaattataaagtgcaggcttcttggac 971
|||||||||||||||||||| | ||||||| |||| ||||||||||
Sbjct: 222 gtgagatatgggtcatgaaagagtataaagggcagtcttcttggac 267
>gnl|LJGI|TC63103 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 817
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 205 atttccgatccccaattcaagaaatcccattttgacctaaatgctgcacccac 257
||||| |||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 340 atttctgatccccaattcggtaaatcccattttgacctagctgctgcacccac 392
>gnl|LJGI|TC78685 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 506
Score = 54.0 bits (27), Expect = 3e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 208 tccgatccccaattcaagaaatcccattttgacctaaatgctgcacccact 258
||||||||| ||||| |||||||||||||||||| |||||||||||||
Sbjct: 145 tccgatcccaaattcggtaaatcccattttgacctagctgctgcacccact 195
>gnl|LJGI|TC73974 weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 783
Score = 54.0 bits (27), Expect = 3e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 205 atttccgatccccaattcaagaaatcccattttgaccta 243
|||||||||||||||||| ||||||||||||||||||
Sbjct: 224 atttccgatccccaattcggtaaatcccattttgaccta 262