Miyakogusa Predicted Gene

Lj0g3v0322299.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0322299.1 Non Chatacterized Hit- tr|C5Z8V5|C5Z8V5_SORBI
Putative uncharacterized protein Sb10g028790
OS=Sorghu,46.08,2e-19,LIGHT-INDUCIBLE PROTEIN ATLS1,NULL; MACROPHAGE
MIGRATION INHIBITORY FACTOR RELATED,Macrophage migrat,CUFF.21871.1
         (339 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71110 similar to UniRef100_A7QFF9 Cluster: Chromosome...   672   0.0  

>gnl|LJGI|TC71110 similar to UniRef100_A7QFF9 Cluster: Chromosome chr8 scaffold_88,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_88, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (93%)
          Length = 513

 Score =  672 bits (339), Expect = 0.0
 Identities = 339/339 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccttgtctttacatccacaccaacattaacttagatggtgtcgacaccgattccatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31  atgccttgtctttacatccacaccaacattaacttagatggtgtcgacaccgattccatc 90

                                                                       
Query: 61  ttttctgaagccaccaccgctgtctctacaatcataggaaaaccagagaagtttgtgatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  ttttctgaagccaccaccgctgtctctacaatcataggaaaaccagagaagtttgtgatg 150

                                                                       
Query: 121 gtcctattgaaggggtcagtgccaatatcgttcgagtgtaacaaagaaccagcagcatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtcctattgaaggggtcagtgccaatatcgttcgagtgtaacaaagaaccagcagcatat 210

                                                                       
Query: 181 gctgagataatttcaatgggtggcataaattcagaagtgaagaagaagctaatttatacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gctgagataatttcaatgggtggcataaattcagaagtgaagaagaagctaatttatacc 270

                                                                       
Query: 241 attggcacaatattgcagtccaagctatctataccaagaacaagattttttctcaaagtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 attggcacaatattgcagtccaagctatctataccaagaacaagattttttctcaaagtc 330

                                                  
Query: 301 tttgacacaacactatttcgtaataaatccaaattgtaa 339
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tttgacacaacactatttcgtaataaatccaaattgtaa 369