Miyakogusa Predicted Gene
- Lj0g3v0322239.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0322239.3 Non Chatacterized Hit- tr|B9RLT0|B9RLT0_RICCO ATP
binding protein, putative OS=Ricinus communis GN=R,58.92,0,DEAD-like
helicases superfamily,Helicase, superfamily 1/2, ATP-binding domain;
helicase superfamily ,CUFF.21862.3
(3492 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC592870 similar to UniRef100_A7PDF4 Cluster: Chromosom... 1094 0.0
gnl|LJGI|TC73481 103 7e-21
>gnl|LJGI|DC592870 similar to UniRef100_A7PDF4 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 587
Score = 1094 bits (552), Expect = 0.0
Identities = 577/587 (98%), Gaps = 10/587 (1%)
Strand = Plus / Plus
Query: 834 caatcctgtacatttaaaaagatgtcctagagtagtggttatttcttataccatgctcca 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caatcctgtacatttaaaaagatgtcctagagtagtggttatttcttataccatgctcca 60
Query: 894 tcgtctaaggaagagcatgcttgagcgtgagtgggctcttttaattgttgatgaatccca 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtctaaggaagagcatgcttgagcgtgagtgggctcttttaattgttgatgaatccca 120
Query: 954 tcatgtgcgatgtacacagaaagcctcagaaccagaagagataaaggctgttcttgatgt 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcatgtgcgatgtacacagaaagcctcagaaccagaagagataaaggctgttcttgatgt 180
Query: 1014 ggcttcgaaagtcaggcgtataattctgctatcagggacaccttctttgtcaagg----- 1068
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcttcgaaagtcaggcgtataattctgctatcagggacaccttctttgtcaaggtgctc 240
Query: 1069 -----ccatatgacatatatcatcagataaatatgttatggccaggtttgctggggaaga 1123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ataggccatatgacatatatcatcagataaatatgttatggccaggtttgctggggaaga 300
Query: 1124 ataaatatgagtttgcaaaaacttattgtgatttgaaatatatgaagggcgtgcaaggaa 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataaatatgagtttgcaaaaacttattgtgatttgaaatatatgaagggcgtgcaaggaa 360
Query: 1184 aatattttgcgaactattcaaaaggagttcgcttggaggagttgaatgtattactaaagc 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatattttgcgaactattcaaaaggagttcgcttggaggagttgaatgtattactaaagc 420
Query: 1244 aaactgttatgataaggcgtctgaaggagcatgtgatgctacagttacctccaaaacgac 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaactgttatgataaggcgtctgaaggagcatgtgatgctacagttacctccaaaacgac 480
Query: 1304 ggcaaattataagactgttgttgaagagatctgatctagttgctgcaaaaactgcagttg 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggcaaattataagactgttgttgaagagatctgatctagttgctgcaaaaactgcagttg 540
Query: 1364 ggccattgaaaattgatgcatctgaaaatgcaaatgaagacatgcct 1410
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggccattgaaaattgatgcatctgaaaatgcaaatgaagacatgcct 587
>gnl|LJGI|TC73481
Length = 595
Score = 103 bits (52), Expect = 7e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 3441 tgagcttttagtcattgttcctggaagtgcctactctctagctgacagctaa 3492
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagcttttagtcattgttcctggaagtgcctactctctagctgacagctaa 52