Miyakogusa Predicted Gene

Lj0g3v0321809.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0321809.1 Non Chatacterized Hit- tr|A2WQI0|A2WQI0_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,23.55,1e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR_3,Pentatricopeptide repeat; no
des,CUFF.21818.1
         (1259 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS334701 similar to UniRef100_A7QIR8 Cluster: Chromosom...   692   0.0  

>gnl|LJGI|FS334701 similar to UniRef100_A7QIR8 Cluster: Chromosome chr9 scaffold_104,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_104, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 679

 Score =  692 bits (349), Expect = 0.0
 Identities = 358/360 (99%), Gaps = 2/360 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtccaaaatggctttccggtcactcttctctaggtataaaaacttaacctctgtggtt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 322 atgtccaaaatggctttccggtcactcttctctaggtataaaaacttaacctctg--gtt 379

                                                                       
Query: 61  tgtcctcttttccaacacaagcaaaactgccatcactttcactctttgccaaccccacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtcctcttttccaacacaagcaaaactgccatcactttcactctttgccaaccccacaa 439

                                                                       
Query: 121 gtgtttaacccattattaccagaccttgtgagtgagatttctcgtgtagtcagtgatcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgtttaacccattattaccagaccttgtgagtgagatttctcgtgtagtcagtgatcat 499

                                                                       
Query: 181 cgacaccctcaccatgatctagaactctctctcaatcaattttcagcacaaatttcctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cgacaccctcaccatgatctagaactctctctcaatcaattttcagcacaaatttcctct 559

                                                                       
Query: 241 gatttagttgagcaagtcttgaaaaggtgtaagaatctcggcttctcagcccacagattc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatttagttgagcaagtcttgaaaaggtgtaagaatctcggcttctcagcccacagattc 619

                                                                       
Query: 301 ttcctttgggctaaatcaattccaggttttcagcacagtgttgaaagtttccacattttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcctttgggctaaatcaattccaggttttcagcacagtgttgaaagtttccacattttg 679