Miyakogusa Predicted Gene
- Lj0g3v0321769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0321769.1 Non Chatacterized Hit- tr|I1ND03|I1ND03_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.14317 PE,74.9,0,SBT
domain,Transcription factor, SBP-box; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL;,CUFF.21906.1
(3072 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68896 similar to UniRef100_A7QPJ0 Cluster: Chromosome... 607 e-172
gnl|LJGI|DC593301 similar to UniRef100_UPI00006CA3C2 Cluster: Cy... 333 4e-90
gnl|LJGI|TC70699 similar to UniRef100_A7QPJ0 Cluster: Chromosome... 293 3e-78
gnl|LJGI|BW603696 129 1e-28
>gnl|LJGI|TC68896 similar to UniRef100_A7QPJ0 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 766
Score = 607 bits (306), Expect = e-172
Identities = 374/402 (93%), Gaps = 2/402 (0%)
Strand = Plus / Plus
Query: 1 atggaaaaagtggctcctccattacctcctatggcagcggtgcacggtttattttacgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atggaaaaagtggctcctccattacctcctatggcagcggtgcacggtttattttacgat 424
Query: 61 ccggcatcaacggcggcgagcaagaagcgcgatctgtcgtacgatgtgggtcgcgtgacg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 425 ccggcatcaacggcggcgagcaagaagcgcgatctgtcgtacaatgtgggtcgcgtgacg 484
Query: 121 gagaattggaaccctaaggaatggaattgggacagcgtgagattcatggcgaaaccgtca 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gaaaattggaaccctaaggaatggaattgggacagcgtgagattcatggcgaaaccgtca 544
Query: 181 ggtacggtcacatcacnnnnnnnnnnnnnnnnnnnggaag--acggagagggtttagggt 238
|||||||||||||||| | || ||||| ||||||||||||
Sbjct: 545 ggtacggtcacatcacgaggaggaggaggaggaggaggagaaacggaaagggtttagggt 604
Query: 239 tgaagctgaacctcggcggcgcgaacaagagggtgcgctcggggtcacctggaacggcgt 298
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 605 tgaagctgaacctcggcggcgcgaacaaaagggtgcgctcggggtcacctggaacggcgt 664
Query: 299 cgtacccgatgtgtcaagtggataactgcggcgaggatctgacgagggcgaaggactacc 358
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 665 cgtacccgatgtgtcaagtggataactgcggcgaggatctgacaagggcgaaggactacc 724
Query: 359 accggaggcacaaggtgtgcgaggcgcatagcaaggcatcga 400
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 accggaggcacaaggtgtgcgaggcgcatagcaaggcatcga 766
>gnl|LJGI|DC593301 similar to UniRef100_UPI00006CA3C2 Cluster: Cyclin N-terminal
domain containing protein; n=1; Tetrahymena thermophila
SB210|Rep:, partial (1%)
Length = 415
Score = 333 bits (168), Expect = 4e-90
Identities = 189/196 (96%)
Strand = Plus / Plus
Query: 1 atggaaaaagtggctcctccattacctcctatggcagcggtgcacggtttattttacgat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 219 atggaaaaagtggctcctccattacctcctatggcagcggtgcacggtttattttattaa 278
Query: 61 ccggcatcaacggcggcgagcaagaagcgcgatctgtcgtacgatgtgggtcgcgtgacg 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcgttttcaacggcggcgagcaagaagcgcgatctgtcgtacgatgtgggtcgcgtgacg 338
Query: 121 gagaattggaaccctaaggaatggaattgggacagcgtgagattcatggcgaaaccgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gagaattggaaccctaaggaatggaattgggacagcgtgagattcatggcgaaaccgtca 398
Query: 181 ggtacggtcacatcac 196
||||||||||||||||
Sbjct: 399 ggtacggtcacatcac 414
>gnl|LJGI|TC70699 similar to UniRef100_A7QPJ0 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 851
Score = 293 bits (148), Expect = 3e-78
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 2925 aaagggctggcttcaccgtccctttattcattcgatacttgctgttgctgctgtttgtgt 2984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaagggctggcttcaccgtccctttattcattcgatacttgctgttgctgctgtttgtgt 60
Query: 2985 atgtgtttgtgtgttcttccgaggaacccctttcgtaggctcagagggtcccttcaggtg 3044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgtgtttgtgtgttcttccgaggaacccctttcgtaggctcagagggtcccttcaggtg 120
Query: 3045 ggaaaatttggattatggcacaatgtaa 3072
||||||||||||||||||||||||||||
Sbjct: 121 ggaaaatttggattatggcacaatgtaa 148
>gnl|LJGI|BW603696
Length = 455
Score = 129 bits (65), Expect = 1e-28
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 640 ggaaaatttgaggaaagaaggtcccaagttccagataaggagcagcttgttcagattctt 699
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 387 ggaaaatttgaggaaagaaggtcccaagctccagataaggagcagcttgttcagattctt 446
Query: 700 aataggata 708
|||||||||
Sbjct: 447 aataggata 455