Miyakogusa Predicted Gene
- Lj0g3v0321629.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0321629.1 Non Chatacterized Hit- tr|K4CAK8|K4CAK8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,71.23,0,Synaptobrevin,Synaptobrevin; Longin,Longin domain;
LONGIN,Longin domain; V_SNARE,Synaptobrevin; SYNA,CUFF.21811.1
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV417281 similar to UniRef100_A7QTI2 Cluster: Chromosom... 650 0.0
gnl|LJGI|BP053113 weakly similar to UniRef100_A7NW41 Cluster: Ch... 224 5e-58
gnl|LJGI|TC66535 similar to UniRef100_A7QKU3 Cluster: Chromosome... 159 3e-38
gnl|LJGI|GO023541 similar to UniRef100_A7QKU3 Cluster: Chromosom... 78 8e-14
gnl|LJGI|TC74310 similar to UniRef100_P47192 Cluster: Vesicle-as... 64 1e-09
gnl|LJGI|TC62632 similar to UniRef100_A7QTI2 Cluster: Chromosome... 58 7e-08
>gnl|LJGI|AV417281 similar to UniRef100_A7QTI2 Cluster: Chromosome undetermined
scaffold_168, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (49%)
Length = 423
Score = 650 bits (328), Expect = 0.0
Identities = 328/328 (100%)
Strand = Plus / Plus
Query: 1 atgggggaacaatcgctgatatacagcttcgtggcgcgtgggactgtgatcctggcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgggggaacaatcgctgatatacagcttcgtggcgcgtgggactgtgatcctggcagag 155
Query: 61 cacaccgacttcgtcggaaacttcggggacgtggcgttacagttcttgcagaagcttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cacaccgacttcgtcggaaacttcggggacgtggcgttacagttcttgcagaagcttcca 215
Query: 121 tcatccaataccaagttcacatacaacaccgacggccacaccttcaactacctcgtccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tcatccaataccaagttcacatacaacaccgacggccacaccttcaactacctcgtccac 275
Query: 181 aatggattcacttattgtgttgtggcagtggagtctactggtcgccagattgcaatggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aatggattcacttattgtgttgtggcagtggagtctactggtcgccagattgcaatggcc 335
Query: 241 tttcttgaacgcatcaaggaagattttacaaagagatatgatggaggcaaagctgcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tttcttgaacgcatcaaggaagattttacaaagagatatgatggaggcaaagctgcaaca 395
Query: 301 gcagcacctaaaggcctaaacaaagaat 328
||||||||||||||||||||||||||||
Sbjct: 396 gcagcacctaaaggcctaaacaaagaat 423
>gnl|LJGI|BP053113 weakly similar to UniRef100_A7NW41 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 450
Score = 224 bits (113), Expect = 5e-58
Identities = 150/157 (95%), Gaps = 4/157 (2%)
Strand = Plus / Minus
Query: 514 caggcacaagtttttagggggcagggagaccaactaaggagaaagatgtggtttcagaac 573
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 215 caggcaccagtttttagggggcagggagacccactaaggagaaagatgtggtttcagaac 156
Query: 574 atgaagatgaagctaatagtttttggcatcttattttgcttca-ttcttgtagttgttct 632
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 155 ctgaagatgaagctaatagtttttggcatcttattttgcttcatttcttgtagttgttct 96
Query: 633 tt-cagtgtgt-cgtgggttcaactgt-ggtgaatga 666
|| |||||||| ||||||||||||||| |||||||||
Sbjct: 95 ttccagtgtgtccgtgggttcaactgtnggtgaatga 59
>gnl|LJGI|TC66535 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (65%)
Length = 722
Score = 159 bits (80), Expect = 3e-38
Identities = 209/252 (82%)
Strand = Plus / Plus
Query: 157 cacaccttcaactacctcgtccacaatggattcacttattgtgttgtggcagtggagtct 216
|||||||||| |||||||| |||||||||||||||| || || ||||||||||||||
Sbjct: 401 cacaccttcagttacctcgttgacaatggattcacttactgcgtggtggcagtggagtcc 460
Query: 217 actggtcgccagattgcaatggcctttcttgaacgcatcaaggaagattttacaaagaga 276
||||| |||||| ||||||||||||||||||| |||||||| |||||||| || | |
Sbjct: 461 tttggtcaacagattccaatggcctttcttgaacgtatcaaggaggattttactaaaaaa 520
Query: 277 tatgatggaggcaaagctgcaacagcagcacctaaaggcctaaacaaagaattcggaccc 336
|||| ||||| | |||| |||||||||| | ||| | || ||||||||||| || ||
Sbjct: 521 tatgcaggaggaagagcttcaacagcagctgcaaaaagtcttaacaaagaatttgggcca 580
Query: 337 aagttgaaggagcatatgcaatattgtgtggaacatccagaagaggtttgcaaacttgcg 396
||| |||||||||| ||||| || |||||||| |||||||| |||||| |||||||||
Sbjct: 581 aagctgaaggagcaaatgcagtactgtgtggagcatccagaggaggttaacaaacttgct 640
Query: 397 acagtaaaagct 408
| ||| ||||||
Sbjct: 641 aaagtgaaagct 652
>gnl|LJGI|GO023541 similar to UniRef100_A7QKU3 Cluster: Chromosome undetermined
scaffold_114, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_114,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (90%)
Length = 770
Score = 77.8 bits (39), Expect = 8e-14
Identities = 242/307 (78%), Gaps = 2/307 (0%)
Strand = Plus / Plus
Query: 154 ggccacaccttcaactacctcgtccacaatggattcacttattgtgttgtggcagtggag 213
|||||||| ||||| ||||| || | ||||| |||||||| ||||| || ||||| ||
Sbjct: 250 ggccacacgttcaattaccttgttgaaaatggcttcacttactgtgtggtcgcagttgaa 309
Query: 214 tctactggtcgccagattgcaatggcctttcttgaacgcatcaaggaagatttta-caaa 272
||| ||||| | ||||| | || |||||||| || || |||||||||| || | ||||
Sbjct: 310 tctgctggtagacagatccctattgcctttctagagcgtgtcaaggaagaattcagcaaa 369
Query: 273 gagatatgatggaggcaaagctgcaacagcagcacctaaaggcctaaacaaagaattcgg 332
|| |||| |||||||||||||||||| || || || | |||||||||||||||| ||
Sbjct: 370 aag-tatggtggaggcaaagctgcaactgcttcaactcacagcctaaacaaagaatttgg 428
Query: 333 acccaagttgaaggagcatatgcaatattgtgtggaacatccagaagaggtttgcaaact 392
|| || |||||| | || |||||||||||||| || ||||| |||||| | |||| ||
Sbjct: 429 gcctaaattgaagcaacaaatgcaatattgtgttgatcatcctgaagagatcagcaagct 488
Query: 393 tgcgacagtaaaagctgaggtttccgaagtccagcaagttatgatggcaaatattgatca 452
||| | ||| || ||| | ||||| |||||| | ||||||||||| ||| ||||| |
Sbjct: 489 tgccaaagtgaaggctcaagtttctgaagtcaaaggagttatgatggaaaacattgagaa 548
Query: 453 ggttctt 459
|||||||
Sbjct: 549 ggttctt 555
>gnl|LJGI|TC74310 similar to UniRef100_P47192 Cluster: Vesicle-associated membrane
protein 722; n=1; Arabidopsis thaliana|Rep:
Vesicle-associated membrane protein 722 - Arabidopsis
thaliana (Mouse-ear cress), partial (40%)
Length = 634
Score = 63.9 bits (32), Expect = 1e-09
Identities = 131/164 (79%)
Strand = Plus / Plus
Query: 403 aaagctgaggtttccgaagtccagcaagttatgatggcaaatattgatcaggttcttaat 462
|||||| ||||||| |||||| | ||||||||||| ||||||||| |||||||| |
Sbjct: 6 aaagctcaggtttctgaagtcaaaggagttatgatggaaaatattgagaaggttcttgac 65
Query: 463 cgtcaggtgaagattgatgttttggtggataaaactgaggaccttcacgatcaggcacaa 522
||| || ||| ||||| |||||||||||||||| || |||||| | ||||||||||
Sbjct: 66 cgtggggagaaaattgagcttttggtggataaaacagataaccttcgctctcaggcacaa 125
Query: 523 gtttttagggggcagggagaccaactaaggagaaagatgtggtt 566
| ||| ||| |||||| ||| | |||||||||||||||||
Sbjct: 126 gatttcaggcaacagggaacccagattaggagaaagatgtggtt 169
>gnl|LJGI|TC62632 similar to UniRef100_A7QTI2 Cluster: Chromosome undetermined
scaffold_168, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 1027
Score = 58.0 bits (29), Expect = 7e-08
Identities = 89/109 (81%)
Strand = Plus / Plus
Query: 314 gcctaaacaaagaattcggacccaagttgaaggagcatatgcaatattgtgtggaacatc 373
|||| ||||| ||||| || |||||||||||||| || ||||| || ||||| || ||||
Sbjct: 496 gcctgaacaaggaatttgggcccaagttgaaggaacacatgcagtactgtgttgatcatc 555
Query: 374 cagaagaggtttgcaaacttgcgacagtaaaagctgaggtttccgaagt 422
| ||||||||| |||| || || | || |||||| ||||||| |||||
Sbjct: 556 ctgaagaggttagcaagctggcaaaggtgaaagctcaggtttctgaagt 604