Miyakogusa Predicted Gene

Lj0g3v0321409.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0321409.1 Non Chatacterized Hit- tr|A5C5N7|A5C5N7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,45.83,0.053,Protein kinase-like (PK-like),Protein kinase-like
domain; Pkinase,Protein kinase, catalytic domain;
,NODE_58761_length_708_cov_15.064972.path1.1
         (382 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65094 similar to UniRef100_A7Q3B3 Cluster: Chromosome...   149   1e-35

>gnl|LJGI|TC65094 similar to UniRef100_A7Q3B3 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 690

 Score =  149 bits (75), Expect = 1e-35
 Identities = 135/155 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagaggaactagaggctatcttgccccagagtggacttctggggtggctgtcacggca 60
           ||||||||||| |||||||||||||| ||||||||||  ||||| |||||| |||| || 
Sbjct: 61  atgagaggaacaagaggctatcttgcaccagagtggatctctggagtggctatcactgcc 120

                                                                       
Query: 61  aaagctgatgtgtacagctatggaataatgctttttgagtttgtatcaggtaggaggaac 120
           ||||||||||| |||||||||||||| |||||||||||| |||| || || ||||| |||
Sbjct: 121 aaagctgatgtttacagctatggaatgatgctttttgagattgtttccggaaggagaaac 180

                                              
Query: 121 tctgacccatctaaagatggccaagttaaggtctt 155
           ||||| || ||| ||||||||| ||||||| ||||
Sbjct: 181 tctgatccttctgaagatggcctagttaagttctt 215