Miyakogusa Predicted Gene
- Lj0g3v0321149.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0321149.1 tr|G7KEX4|G7KEX4_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_5g020610 PE=4
SV=1,49.02,0.001,F-box,F-box domain, cyclin-like; FAMILY NOT
NAMED,NULL; no description,NULL; F-box domain,F-box doma,CUFF.21773.1
(1251 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 856 0.0
gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 220 2e-56
gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 198 6e-50
gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 184 9e-46
gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cy... 147 2e-34
gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 143 3e-33
gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cy... 84 2e-15
gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-lik... 84 2e-15
gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyc... 80 4e-14
gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 72 9e-12
gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cy... 66 6e-10
gnl|LJGI|FS355262 similar to UniRef100_A2Q574 Cluster: Cyclin-li... 60 4e-08
gnl|LJGI|FS338181 similar to UniRef100_A0DQC5 Cluster: Chromosom... 58 1e-07
>gnl|LJGI|BP063614 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 508
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 atgtctaattcaactgatgagatgttaatgccgccgaaggcgaagagaggaagacaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atgtctaattcaactgatgagatgttaatgccgccgaaggcgaagagaggaagacaaagt 136
Query: 61 ttgaatgaaaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ttgaatgaaaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcatt 196
Query: 121 ctccttcacattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctccttcacattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtcc 256
Query: 181 acaagatggaaggatctctggaaacgtcttccttccctcatactactgtcctcaaacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acaagatggaaggatctctggaaacgtcttccttccctcatactactgtcctcaaacttt 316
Query: 241 tggacatataagagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tggacatataagagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcg 376
Query: 301 accgcgctgcacggtctagattttgagcatgatggtcacattcagcctcacctcctcaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 accgcgctgcacggtctagattttgagcatgatggtcacattcagcctcacctcctcaaa 436
Query: 361 aggattgtaaaatatgctgtttcacacaatgtccaacgattaggattgtccgtcacgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aggattgtaaaatatgctgtttcacacaatgtccaacgattaggattgtccgtcacgtgt 496
Query: 421 gctattgaacac 432
||||||||||||
Sbjct: 497 gctattgaacac 508
>gnl|LJGI|BP071245 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 552
Score = 220 bits (111), Expect = 2e-56
Identities = 144/155 (92%)
Strand = Plus / Plus
Query: 72 tgaaaatgaagataacaaagatagactcagtgacttgcctgattgcattctccttcacat 131
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 363 tgaaaatgaagagaacaaagatagactcagtgacttgcctgattgcgttctccttcacat 422
Query: 132 tctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtccacaagatggaa 191
||| ||||||||||| ||||| || ||||||||||||| ||| ||||||||||||||
Sbjct: 423 tctgtcatttgtgaatgccaagtatgcagttcaaacttgcacattatccacaagatggaa 482
Query: 192 ggatctctggaaacgtcttccttccctcatactac 226
|||||||||||||||||||||||||||||||||||
Sbjct: 483 ggatctctggaaacgtcttccttccctcatactac 517
>gnl|LJGI|TC72353 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 1467
Score = 198 bits (100), Expect = 6e-50
Identities = 142/156 (91%)
Strand = Plus / Plus
Query: 253 agcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcgaccgcgctgcac 312
||||||||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||
Sbjct: 399 agcttcaccaaattcgtgtctcgccttctgactcttcgcgatcgctcaaccgcgctgcac 458
Query: 313 ggtctagattttgagcatgatggtcacattcagcctcacctcctcaaaaggattgtaaaa 372
|||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct: 459 ggtctagattttgagcgtcttggttgtattcagcctcacctcctcaaaaggattgtaaag 518
Query: 373 tatgctgtttcacacaatgtccaacgattaggattg 408
||||| |||||||||||||| || ||||||||||||
Sbjct: 519 tatgccgtttcacacaatgtgcagcgattaggattg 554
Score = 97.6 bits (49), Expect = 2e-19
Identities = 166/205 (80%)
Strand = Plus / Plus
Query: 1 atgtctaattcaactgatgagatgttaatgccgccgaaggcgaagagaggaagacaaagt 60
||||| |||||||| ||||| |||||| ||| |||||| || ||||||||||| | |
Sbjct: 140 atgtccaattcaacagatgaaatgttattgcagccgaatgccaagagaggaaggaggaat 199
Query: 61 ttgaatgaaaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcatt 120
|| ||| | ||| | |||||| || ||||| || || |||||||| |||||||| ||
Sbjct: 200 gagattgagactgatattgaagagaataaagacaggcttagtgacttacctgattgtata 259
Query: 121 ctccttcacattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtcc 180
|||||| ||||| |||||||||||||||||||| || || ||||| ||| |||| |||
Sbjct: 260 ctcctttacattttatcatttgtgaaagccaaacacgtagtccaaacatgcgtattatcc 319
Query: 181 acaagatggaaggatctctggaaac 205
| ||||||||||||||| |||||||
Sbjct: 320 aaaagatggaaggatctttggaaac 344
Score = 93.7 bits (47), Expect = 3e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1164 attttcatctatacctgatggaatagtggactttttgcttcaaaactcgccatctgcaaa 1223
||||||||||||||| ||||||| |||||||| ||||||||||||||| || ||||| ||
Sbjct: 1193 attttcatctataccggatggaacagtggactatttgcttcaaaactcaccctctgccaa 1252
Query: 1224 ggttgacatca 1234
|||||||||||
Sbjct: 1253 ggttgacatca 1263
Score = 83.8 bits (42), Expect = 2e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 521 ttccgaaatctcttaatttgccagcattaactacgttgcatctagagcattttgcctttt 580
||||||||||||||| |||||||||| ||||||| |||||| ||| | |||||| |||||
Sbjct: 670 ttccgaaatctcttagtttgccagcactaactaccttgcatttagtgaattttgactttt 729
Query: 581 gtgcaaatga 590
||||||||||
Sbjct: 730 gtgcaaatga 739
Score = 67.9 bits (34), Expect = 1e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 902 ttctactcatctggctggcataccttgccaatataaaatctttaacagtctcgacaagta 961
||||||| | |||||||| | ||||| ||||||||||||| || || || || |||||||
Sbjct: 1030 ttctacttagctggctggtagaccttaccaatataaaatcattgacggtttccacaagta 1089
Query: 962 ctcttcaggttctc 975
||||||||||||||
Sbjct: 1090 ctcttcaggttctc 1103
>gnl|LJGI|TC73420 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (23%)
Length = 714
Score = 184 bits (93), Expect = 9e-46
Identities = 327/405 (80%)
Strand = Plus / Plus
Query: 1 atgtctaattcaactgatgagatgttaatgccgccgaaggcgaagagaggaagacaaagt 60
||||||||||||| ||||||||||| || |||||||| ||||||||||||||| | |||
Sbjct: 108 atgtctaattcaatggatgagatgttgattccgccgaatgcgaagagaggaagaaacagt 167
Query: 61 ttgaatgaaaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcatt 120
|| ||| | ||||| |||||| |||||||| || ||||||||||||| ||||||||||
Sbjct: 168 gagactgagactgaaattgaagacaacaaagacaggctcagtgacttgcatgattgcatt 227
Query: 121 ctccttcacattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtcc 180
|||||||||||| | |||||| ||| |||||| ||| |||| ||| ||||| || |||
Sbjct: 228 ctccttcacattttgtcatttctgagcgccaaatacgcagttcgaacatgcatgttatcc 287
Query: 181 acaagatggaaggatctctggaaacgtcttccttccctcatactactgtcctcaaacttt 240
| |||||||||||||||||||||||| ||||| ||| || |||| |||||| | |||
Sbjct: 288 aaaagatggaaggatctctggaaacgccttccgaaccttattttactctcctcagatttt 347
Query: 241 tggacatataagagcttcaccaaattcgtgtctcggcttttgactcttcgcgatggctcg 300
|||| ||| ||||||||||| |||||| ||||||| | ||| ||||||
Sbjct: 348 gacacattcaagtttttcaccaaatttgtgtctaccattttgacccgtcgtgatggcaaa 407
Query: 301 accgcgctgcacggtctagattttgagcatgatggtcacattcagcctcacctcctcaaa 360
|| ||||||||| ||| || ||||||| || |||| ||| ||| ||| |||| |||||
Sbjct: 408 actgcgctgcacactctcgaatttgagcgtgttggttccatccagtctcccctcatcaaa 467
Query: 361 aggattgtaaaatatgctgtttcacacaatgtccaacgattagga 405
|| || ||||| ||||||||||| | ||||||||| |||||||||
Sbjct: 468 agaatagtaaactatgctgtttcccgcaatgtccagcgattagga 512
>gnl|LJGI|FS344820 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (24%)
Length = 859
Score = 147 bits (74), Expect = 2e-34
Identities = 172/205 (83%), Gaps = 6/205 (2%)
Strand = Plus / Plus
Query: 1 atgtctaattcaactgatgagatgttaatgccgccgaaggcgaagagaggaagacaaagt 60
|||||||||||||||||||||||||| || |||||||| |||||||||||||| | |||
Sbjct: 93 atgtctaattcaactgatgagatgttgattccgccgaatgcgaagagaggaaggaacagt 152
Query: 61 ttgaatgaaaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcatt 120
|| |||||||||||||| |||||||| || ||||||||| | |||||| |||||
Sbjct: 153 ------gagaatgaaaatgaagacaacaaagacaggctcagtgaccttcctgatggcatt 206
Query: 121 ctccttcacattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtcc 180
|||||||||||| |||||||| |||| |||||| || |||||||| || || || ||
Sbjct: 207 ctccttcacattttatcatttatgaatgccaaatatgcagttcaaacatgtatcttatcg 266
Query: 181 acaagatggaaggatctctggaaac 205
| ||||||||||||||||||||||
Sbjct: 267 gctagatggaaggatctctggaaac 291
>gnl|LJGI|TC65637 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (13%)
Length = 732
Score = 143 bits (72), Expect = 3e-33
Identities = 168/200 (84%)
Strand = Plus / Plus
Query: 100 agtgacttgcctgattgcattctccttcacattctatcatttgtgaaagccaaagccgcg 159
||||| ||||| |||||| |||| ||||||||| | |||||||||||||||| ||
Sbjct: 263 agtgatttgcccgattgcgttctgcttcacattttgtcatttgtgaaagccaggaatgca 322
Query: 160 gttcaaacttgcatattgtccacaagatggaaggatctctggaaacgtcttccttccctc 219
||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| |||
Sbjct: 323 gttcaaacttgcatattatccacaagatggaaggatctatggaaaagtcttccttcgctc 382
Query: 220 atactactgtcctcaaacttttggacatataagagcttcaccaaattcgtgtctcggctt 279
|| |||| ||| || |||||| ||||| |||| |||||||||||||||||| ||||
Sbjct: 383 attttactttccccagacttttcgacattgaagattttcaccaaattcgtgtctaagctt 442
Query: 280 ttgactcttcgcgatggctc 299
||| ||||| ||||||||
Sbjct: 443 ttggaacttcgtgatggctc 462
>gnl|LJGI|GO023715 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 555
Score = 83.8 bits (42), Expect = 2e-15
Identities = 159/198 (80%)
Strand = Plus / Plus
Query: 9 ttcaactgatgagatgttaatgccgccgaaggcgaagagaggaagacaaagtttgaatga 68
|||||| ||||||||||| || ||||| || || |||||||| || || ||| || |||
Sbjct: 107 ttcaacagatgagatgttgattccgccaaatgcaaagagagggaggcacagtgggagtga 166
Query: 69 aaatgaaaatgaagataacaaagatagactcagtgacttgcctgattgcattctccttca 128
||||||| |||||| ||| |||| || || |||||||| || |||||||| ||||||||
Sbjct: 167 gaatgaaattgaagagaacgaagacaggctaagtgacttacccgattgcatcctccttca 226
Query: 129 cattctatcatttgtgaaagccaaagccgcggttcaaacttgcatattgtccacaagatg 188
| || | |||||| |||| ||| | || |||| |||| ||| || |||||||||||
Sbjct: 227 ctttttgtcatttctgaacgccggacgtgcagttcgaactaccatgttatccacaagatg 286
Query: 189 gaaggatctctggaaacg 206
|||| |||||||||||||
Sbjct: 287 gaagaatctctggaaacg 304
Score = 67.9 bits (34), Expect = 1e-10
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 344 agcctcacctcctcaaaaggattgtaaaatatgctgtttcacacaatgtccaacgattag 403
||||||| |||||||||||| | ||||| || ||| |||||||||||||||||| ||||
Sbjct: 442 agcctcatctcctcaaaagggtcgtaaactacgctatttcacacaatgtccaacagttag 501
Query: 404 gattgtccgtcacgtgtg 421
||||| ||||||||||
Sbjct: 502 ctttgtctgtcacgtgtg 519
>gnl|LJGI|TC61828 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (6%)
Length = 881
Score = 83.8 bits (42), Expect = 2e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1169 catctatacctgatggaatagtggactttttgcttcaaaactcgccatctgcaaaggttg 1228
|||| |||||||||||| ||||||||||||| |||||||||||||| || || |||||||
Sbjct: 515 catcgatacctgatggagtagtggactttttacttcaaaactcgccgtccgctaaggttg 574
Query: 1229 acatca 1234
||||||
Sbjct: 575 acatca 580
Score = 77.8 bits (39), Expect = 1e-13
Identities = 135/167 (80%)
Strand = Plus / Plus
Query: 894 tcctttggttctactcatctggctggcataccttgccaatataaaatctttaacagtctc 953
||||||| || |||| | |||||||| | | ||| ||||||||||||| || ||||| ||
Sbjct: 243 tcctttgattttactgagctggctggtagagcttaccaatataaaatcattgacagtatc 302
Query: 954 gacaagtactcttcaggttctctgtctacatcctaagttactgaaacttaagttcccttt 1013
|||| |||||||||||||||| ||| |||| | ||| || |||| ||| || |||
Sbjct: 303 tgcaagaactcttcaggttctcttcctaattcctcatttattggaactcaagctcacttc 362
Query: 1014 gttgggtagcttgaagtcgttgaaagtaatacagaaaccactttcac 1060
||| ||||||||||||| |||||||||| |||| |||||||||||
Sbjct: 363 cttgagtagcttgaagtcattgaaagtaaaacaggtaccactttcac 409
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 823 agcaatctttcttccattgaagaagtgaatattgatg 859
||||||||||||||| ||||| |||||||||||||||
Sbjct: 142 agcaatctttcttcccttgaacaagtgaatattgatg 178
>gnl|LJGI|TC75251 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (14%)
Length = 718
Score = 79.8 bits (40), Expect = 4e-14
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 893 ctcctttggttctactcatctggctggcataccttgccaatataaaatctttaacagtct 952
|||||||||||||||||| |||||||| | | ||| | ||||| ||||| || |||||||
Sbjct: 50 ctcctttggttctactcagctggctggaagagcttactaatatcaaatcattgacagtct 109
Query: 953 cgacaagtactcttcaggttctct 976
| |||| |||||||||||||||||
Sbjct: 110 ctacaaatactcttcaggttctct 133
Score = 71.9 bits (36), Expect = 9e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1174 atacctgatggaatagtggactttttgcttcaaaactcgccatctgcaaaggttga 1229
||||||| |||||||||||||||||||||||||||||| ||| | ||||| |||||
Sbjct: 343 atacctgctggaatagtggactttttgcttcaaaactcaccaacagcaaaagttga 398
>gnl|LJGI|FS347988 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (5%)
Length = 536
Score = 71.9 bits (36), Expect = 9e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 1174 atacctgatggaatagtggactttttgcttcaaaactcgccatctgcaaaggttga 1229
||||||| |||||||||||||||||||||||||||||| ||| | ||||| |||||
Sbjct: 469 atacctgctggaatagtggactttttgcttcaaaactcaccaacagcaaaagttga 414
>gnl|LJGI|BI420296 weakly similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (15%)
Length = 592
Score = 65.9 bits (33), Expect = 6e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 160 gttcaaacttgcatattgtccacaagatggaaggatctctggaaa 204
||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 263 gttcagacttgtgtattgtccacaagatggaaggatctctggaaa 307
>gnl|LJGI|FS355262 similar to UniRef100_A2Q574 Cluster: Cyclin-like F-box; n=1; Medicago
truncatula|Rep: Cyclin-like F-box - Medicago truncatula
(Barrel medic), partial (6%)
Length = 654
Score = 60.0 bits (30), Expect = 4e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 1177 cctgatggaatagtggactttttgcttcaaaactcgccatctgcaaaggttgacatca 1234
|||||||||||||||||||||||| ||||||| || ||||| ||| | ||||| ||||
Sbjct: 235 cctgatggaatagtggactttttgattcaaaattcaccatcagcagaagttgaaatca 178
>gnl|LJGI|FS338181 similar to UniRef100_A0DQC5 Cluster: Chromosome undetermined
scaffold_6, whole genome shotgun sequence; n=1;
Paramecium tetraurelia|Rep: Chromosome undetermined
scaffold_6, whole genome shotgun sequence - Paramecium
tetraurelia, partial (3%)
Length = 740
Score = 58.0 bits (29), Expect = 1e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 823 agcaatctttcttccattgaagaagtgaatattgatg 859
||||||||||||||| ||||| |||||||||||||||
Sbjct: 704 agcaatctttcttcccttgaacaagtgaatattgatg 740