Miyakogusa Predicted Gene
- Lj0g3v0320789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0320789.1 tr|G7L8P4|G7L8P4_MEDTR Exosome complex
exonuclease OS=Medicago truncatula GN=MTR_8g073170 PE=3
SV=1,91.26,0,RIBONUCLEASE_II,Ribonuclease II/R, conserved site;
MITOTIC CONTROL PROTEIN DIS3,NULL; RIBONUCLEASE,N,CUFF.21741.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68730 similar to UniRef100_A7PKV4 Cluster: Chromosome... 448 e-125
gnl|LJGI|BP055674 similar to UniRef100_A7PKV4 Cluster: Chromosom... 170 1e-41
gnl|LJGI|TC82205 similar to UniRef100_A7PKV4 Cluster: Chromosome... 147 2e-34
>gnl|LJGI|TC68730 similar to UniRef100_A7PKV4 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 596
Score = 448 bits (226), Expect = e-125
Identities = 226/226 (100%)
Strand = Plus / Plus
Query: 879 tggattttttgtgtttgttcccaaatacggcatagaaggacctgtatatttgacaacacg 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggattttttgtgtttgttcccaaatacggcatagaaggacctgtatatttgacaacacg 60
Query: 939 agctgaaaagggaaatggagactggtatgttgatgagcaagagcagaagattaaaaagat 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agctgaaaagggaaatggagactggtatgttgatgagcaagagcagaagattaaaaagat 120
Query: 999 ggatggaagcgtttcatatagcattttgcagtcagtccaaattcacatggaggttgtgga 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggatggaagcgtttcatatagcattttgcagtcagtccaaattcacatggaggttgtgga 180
Query: 1059 gccccagcctaacaggccaaaacttcagcttactctcatctagagg 1104
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccccagcctaacaggccaaaacttcagcttactctcatctagagg 226
>gnl|LJGI|BP055674 similar to UniRef100_A7PKV4 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 507
Score = 170 bits (86), Expect = 1e-41
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1 atgacaccagaagcagacattatttccagcagatacacaaaaagtgtcataaaatcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgacaccagaagcagacattatttccagcagatacacaaaaagtgtcataaaatcctgt 481
Query: 61 gcagcactgtcttatgttgaagcaca 86
||||||||||||||||||||||||||
Sbjct: 482 gcagcactgtcttatgttgaagcaca 507
>gnl|LJGI|TC82205 similar to UniRef100_A7PKV4 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 506
Score = 147 bits (74), Expect = 2e-34
Identities = 92/98 (93%)
Strand = Plus / Plus
Query: 1007 gcgtttcatatagcattttgcagtcagtccaaattcacatggaggttgtggagccccagc 1066
|||||||||||||| |||||||||| |||| |||||||||||||||||||||||||| ||
Sbjct: 1 gcgtttcatatagccttttgcagtccgtcccaattcacatggaggttgtggagcccccgc 60
Query: 1067 ctaacaggccaaaacttcagcttactctcatctagagg 1104
|| ||||||| |||||||||||||||||||||||||||
Sbjct: 61 cttacaggcccaaacttcagcttactctcatctagagg 98