Miyakogusa Predicted Gene
- Lj0g3v0320179.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0320179.1 Non Chatacterized Hit- tr|I3S7E3|I3S7E3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.05,0,COP9
SIGNALOSOME COMPLEX SUBUNIT 6,NULL; EUKARYOTIC TRANSLATION INITIATION
FACTOR 3 SUBUNIT F-RELATE,CUFF.21698.1
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58355 homologue to UniRef100_A7QQG8 Cluster: Chromoso... 1897 0.0
gnl|LJGI|TC58924 homologue to UniRef100_A7QQG8 Cluster: Chromoso... 1164 0.0
gnl|LJGI|TC66254 homologue to UniRef100_A7QQG8 Cluster: Chromoso... 1072 0.0
gnl|LJGI|BP059081 90 3e-17
>gnl|LJGI|TC58355 homologue to UniRef100_A7QQG8 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(95%)
Length = 1575
Score = 1897 bits (957), Expect = 0.0
Identities = 957/957 (100%)
Strand = Plus / Plus
Query: 1 atggcttcctcgtcgagcagcggattgacattcaagctacaccctctggtaatcgtcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atggcttcctcgtcgagcagcggattgacattcaagctacaccctctggtaatcgtcaac 210
Query: 61 atctccgaccactacaccagagtcaaatctcagatgaacccaacccttgctcctcacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atctccgaccactacaccagagtcaaatctcagatgaacccaacccttgctcctcacaac 270
Query: 121 agcgtcccgagtaatggcgctgacggcgtcgtttcttctgtcccccctagggtctatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agcgtcccgagtaatggcgctgacggcgtcgtttcttctgtcccccctagggtctatggc 330
Query: 181 tgcgtcatcggagtgcagaagggtcgcaccgtcgagatcttcaacagctttgagcttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgcgtcatcggagtgcagaagggtcgcaccgtcgagatcttcaacagctttgagcttctc 390
Query: 241 tatgatccttctacccattcgcttgatcgtcccttcctcgagaagaagcaagagctctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tatgatccttctacccattcgcttgatcgtcccttcctcgagaagaagcaagagctctat 450
Query: 301 aagaaggttttcccacatttctacatactgggatggtattcaactgggagtgatgcagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagaaggttttcccacatttctacatactgggatggtattcaactgggagtgatgcagag 510
Query: 361 gaatctgatatgaatattcatagagctttgatggatataaatgaaagtccagtttatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gaatctgatatgaatattcatagagctttgatggatataaatgaaagtccagtttatgtt 570
Query: 421 cttctcaatccttcaatcaatcattctcagaaggatctccctgtcagtatttttgaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cttctcaatccttcaatcaatcattctcagaaggatctccctgtcagtatttttgaaagt 630
Query: 481 gaactgcatgtcatagatgggattccacaacttatctttgttcgctcaagctatactatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gaactgcatgtcatagatgggattccacaacttatctttgttcgctcaagctatactatt 690
Query: 541 gagactgttgaagctgaacggatctcagttgatcacgttgctcatcttaagccgtctgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gagactgttgaagctgaacggatctcagttgatcacgttgctcatcttaagccgtctgat 750
Query: 601 ggtggttcagcagccactcaattggctgctcaccttactggtatacacagtgccatcaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ggtggttcagcagccactcaattggctgctcaccttactggtatacacagtgccatcaaa 810
Query: 661 atgcttcatagcagaataaaggtgctacatcactatcttcttgcaatgcaaaaaggtgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atgcttcatagcagaataaaggtgctacatcactatcttcttgcaatgcaaaaaggtgat 870
Query: 721 gttccttgtgagaattcactgttaagacaagtttcaagtctccttagaagattgcctgct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gttccttgtgagaattcactgttaagacaagtttcaagtctccttagaagattgcctgct 930
Query: 781 attgaatctgggaaatttcaagatgatttcttaatgggatacaatgacaccttattgatt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 attgaatctgggaaatttcaagatgatttcttaatgggatacaatgacaccttattgatt 990
Query: 841 agttaccttaccatgctgaccaactgctcgagtgcaatgaatgaactggtggacaaattc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 agttaccttaccatgctgaccaactgctcgagtgcaatgaatgaactggtggacaaattc 1050
Query: 901 aatactgcatatgataggcacagcagaaggggtggacgaactgctttcatgtgaaat 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 aatactgcatatgataggcacagcagaaggggtggacgaactgctttcatgtgaaat 1107
>gnl|LJGI|TC58924 homologue to UniRef100_A7QQG8 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (56%)
Length = 797
Score = 1164 bits (587), Expect = 0.0
Identities = 587/587 (100%)
Strand = Plus / Plus
Query: 1 atggcttcctcgtcgagcagcggattgacattcaagctacaccctctggtaatcgtcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atggcttcctcgtcgagcagcggattgacattcaagctacaccctctggtaatcgtcaac 263
Query: 61 atctccgaccactacaccagagtcaaatctcagatgaacccaacccttgctcctcacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atctccgaccactacaccagagtcaaatctcagatgaacccaacccttgctcctcacaac 323
Query: 121 agcgtcccgagtaatggcgctgacggcgtcgtttcttctgtcccccctagggtctatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcgtcccgagtaatggcgctgacggcgtcgtttcttctgtcccccctagggtctatggc 383
Query: 181 tgcgtcatcggagtgcagaagggtcgcaccgtcgagatcttcaacagctttgagcttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcgtcatcggagtgcagaagggtcgcaccgtcgagatcttcaacagctttgagcttctc 443
Query: 241 tatgatccttctacccattcgcttgatcgtcccttcctcgagaagaagcaagagctctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatgatccttctacccattcgcttgatcgtcccttcctcgagaagaagcaagagctctat 503
Query: 301 aagaaggttttcccacatttctacatactgggatggtattcaactgggagtgatgcagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagaaggttttcccacatttctacatactgggatggtattcaactgggagtgatgcagag 563
Query: 361 gaatctgatatgaatattcatagagctttgatggatataaatgaaagtccagtttatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaatctgatatgaatattcatagagctttgatggatataaatgaaagtccagtttatgtt 623
Query: 421 cttctcaatccttcaatcaatcattctcagaaggatctccctgtcagtatttttgaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cttctcaatccttcaatcaatcattctcagaaggatctccctgtcagtatttttgaaagt 683
Query: 481 gaactgcatgtcatagatgggattccacaacttatctttgttcgctcaagctatactatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gaactgcatgtcatagatgggattccacaacttatctttgttcgctcaagctatactatt 743
Query: 541 gagactgttgaagctgaacggatctcagttgatcacgttgctcatct 587
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gagactgttgaagctgaacggatctcagttgatcacgttgctcatct 790
>gnl|LJGI|TC66254 homologue to UniRef100_A7QQG8 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 801
Score = 1072 bits (541), Expect = 0.0
Identities = 541/541 (100%)
Strand = Plus / Plus
Query: 1 atggcttcctcgtcgagcagcggattgacattcaagctacaccctctggtaatcgtcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcttcctcgtcgagcagcggattgacattcaagctacaccctctggtaatcgtcaac 320
Query: 61 atctccgaccactacaccagagtcaaatctcagatgaacccaacccttgctcctcacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctccgaccactacaccagagtcaaatctcagatgaacccaacccttgctcctcacaac 380
Query: 121 agcgtcccgagtaatggcgctgacggcgtcgtttcttctgtcccccctagggtctatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcgtcccgagtaatggcgctgacggcgtcgtttcttctgtcccccctagggtctatggc 440
Query: 181 tgcgtcatcggagtgcagaagggtcgcaccgtcgagatcttcaacagctttgagcttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcgtcatcggagtgcagaagggtcgcaccgtcgagatcttcaacagctttgagcttctc 500
Query: 241 tatgatccttctacccattcgcttgatcgtcccttcctcgagaagaagcaagagctctat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgatccttctacccattcgcttgatcgtcccttcctcgagaagaagcaagagctctat 560
Query: 301 aagaaggttttcccacatttctacatactgggatggtattcaactgggagtgatgcagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaaggttttcccacatttctacatactgggatggtattcaactgggagtgatgcagag 620
Query: 361 gaatctgatatgaatattcatagagctttgatggatataaatgaaagtccagtttatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaatctgatatgaatattcatagagctttgatggatataaatgaaagtccagtttatgtt 680
Query: 421 cttctcaatccttcaatcaatcattctcagaaggatctccctgtcagtatttttgaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttctcaatccttcaatcaatcattctcagaaggatctccctgtcagtatttttgaaagt 740
Query: 481 gaactgcatgtcatagatgggattccacaacttatctttgttcgctcaagctatactatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaactgcatgtcatagatgggattccacaacttatctttgttcgctcaagctatactatt 800
Query: 541 g 541
|
Sbjct: 801 g 801
>gnl|LJGI|BP059081
Length = 455
Score = 89.7 bits (45), Expect = 3e-17
Identities = 72/77 (93%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 814 atgggatacaatgacaccttattgattagttacctt-accatgctgaccaactgctc-ga 871
||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||| ||
Sbjct: 455 atgggataccatgacaccttattgattagttaccttgaccatgctgacccactgctcgga 396
Query: 872 gtg-caatgaatgaact 887
||| |||||||||||||
Sbjct: 395 gtgccaatgaatgaact 379