Miyakogusa Predicted Gene

Lj0g3v0320009.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0320009.1 Non Chatacterized Hit- tr|G7JTT1|G7JTT1_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,85.04,0,Protein
kinase-like (PK-like),Protein kinase-like domain;
PROTEIN_KINASE_DOM,Protein kinase, catalyt,CUFF.21685.1
         (1398 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS331256 homologue to UniRef100_A7P1N5 Cluster: Chromos...    76   7e-13
gnl|LJGI|TC78632 weakly similar to UniRef100_Q4J7Y6 Cluster: Con...    64   3e-09
gnl|LJGI|TC77473 similar to UniRef100_Q1SKZ8 Cluster: Protein ki...    62   1e-08
gnl|LJGI|FS332742 homologue to UniRef100_A7P1N5 Cluster: Chromos...    52   1e-05
gnl|LJGI|FS352314 similar to UniRef100_A7Q5S2 Cluster: Chromosom...    52   1e-05

>gnl|LJGI|FS331256 homologue to UniRef100_A7P1N5 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (32%)
          Length = 817

 Score = 75.8 bits (38), Expect = 7e-13
 Identities = 164/206 (79%)
 Strand = Plus / Plus

                                                                        
Query: 881  tgacaagccgtgtagtaactctgtggtatagaccacctgaacttctactcggagctaatc 940
            |||||||||| || || ||||| |||||||| || ||||| |||||||||||||||| | 
Sbjct: 590  tgacaagccgagttgtcactctttggtataggccgcctgagcttctactcggagctactt 649

                                                                        
Query: 941  gttatggggttgcagtagatttatggagcactggttgcatactgggggaactatatgctg 1000
             ||||||   ||| |||||||| ||||| || ||||||||||| |  || |||||||| |
Sbjct: 650  attatggcactgctgtagatttgtggagtacaggttgcatacttgctgagctatatgcag 709

                                                                        
Query: 1001 gcagacccattttgccgggcaaaacagaggttgagcagttgcatcggatttttaaactct 1060
            |||  || ||  |||| || | ||| ||||| |||||  |||||   ||||||||||| |
Sbjct: 710  gcaagcctataatgcctggtagaactgaggtggagcaactgcataaaatttttaaacttt 769

                                      
Query: 1061 gtggctcaccatctgacgactattgg 1086
            |||| ||||| || || |||||||||
Sbjct: 770  gtggttcaccttccgaggactattgg 795



 Score = 52.0 bits (26), Expect = 1e-05
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 508 tttgacaatcttgatcctgagagtgtcaagtttatggcgagggaaatccatgttctgcgt 567
           ||||| |||||||| |||||||||||    || ||||| |||||||| ||  || |||||
Sbjct: 217 tttgataatcttgagcctgagagtgttcgcttcatggcaagggaaattcacattttgcgt 276

                             
Query: 568 aggcttgaccatccaaat 585
           |||||||| |||||||||
Sbjct: 277 aggcttgatcatccaaat 294


>gnl|LJGI|TC78632 weakly similar to UniRef100_Q4J7Y6 Cluster: Conserved membrane
            protein; n=1; Sulfolobus acidocaldarius|Rep: Conserved
            membrane protein - Sulfolobus acidocaldarius, partial
            (5%)
          Length = 389

 Score = 63.9 bits (32), Expect = 3e-09
 Identities = 73/86 (84%), Gaps = 8/86 (9%)
 Strand = Plus / Plus

                                                                        
Query: 1130 accattataggcgatgtattactgagaca-------tttaaggaatacccatctactgct 1182
            |||||||||||| ||||||||||||||||       | ||||||||| ||||||||||||
Sbjct: 120  accattataggctatgtattactgagacacttaaggtctaaggaatatccatctactgct 179

                                      
Query: 1183 gttaagcttatagagaccctactttc 1208
            | |||||||| | |||||||||||||
Sbjct: 180  gctaagcttaca-agaccctactttc 204


>gnl|LJGI|TC77473 similar to UniRef100_Q1SKZ8 Cluster: Protein kinase-like; n=1;
           Medicago truncatula|Rep: Protein kinase-like - Medicago
           truncatula (Barrel medic), partial (51%)
          Length = 1065

 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 883 acaagccgtgtagtaactctgtggtatagaccacctgaacttctactcggagcta 937
           ||||| |||||||||||  ||||||| ||||||||||||||| |||| |||||||
Sbjct: 16  acaagtcgtgtagtaaccttgtggtacagaccacctgaacttttacttggagcta 70


>gnl|LJGI|FS332742 homologue to UniRef100_A7P1N5 Cluster: Chromosome chr19 scaffold_4,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_4, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 743

 Score = 52.0 bits (26), Expect = 1e-05
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 508 tttgacaatcttgatcctgagagtgtcaagtttatggcgagggaaatccatgttctgcgt 567
           ||||| |||||| | |||||||||||    || ||||| |||||||| ||  ||||||||
Sbjct: 265 tttgataatcttcagcctgagagtgttcgcttcatggcaagggaaattcacattctgcgt 324

                             
Query: 568 aggcttgaccatccaaat 585
           |||||||| |||||||||
Sbjct: 325 aggcttgatcatccaaat 342


>gnl|LJGI|FS352314 similar to UniRef100_A7Q5S2 Cluster: Chromosome chr14 scaffold_54,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_54, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (38%)
          Length = 784

 Score = 52.0 bits (26), Expect = 1e-05
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 1280 cttgtgatccatcaagtttaccaaaatatcctcc 1313
            ||||||| ||||||||||||||||| ||||||||
Sbjct: 371  cttgtgaaccatcaagtttaccaaagtatcctcc 338