Miyakogusa Predicted Gene

Lj0g3v0319629.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0319629.1 tr|A9SAQ5|A9SAQ5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_163856,53.77,6e-19,UBIQUITIN_2,Ubiquitin supergroup;
Ubiquitin-like,NULL; no description,NULL; Rad60-SLD,Small
ubiquiti,CUFF.21656.1
         (327 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64113 weakly similar to UniRef100_A2TKE7 Cluster: Ubi...   648   0.0  

>gnl|LJGI|TC64113 weakly similar to UniRef100_A2TKE7 Cluster: Ubiquitin-like protein;
           n=1; Pisum sativum|Rep: Ubiquitin-like protein - Pisum
           sativum (Garden pea), partial (66%)
          Length = 659

 Score =  648 bits (327), Expect = 0.0
 Identities = 327/327 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagcagcatcagcctcaggtgaaagaggaagccaagatcaggatcaggagaagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  atgtcagcagcatcagcctcaggtgaaagaggaagccaagatcaggatcaggagaagaag 152

                                                                       
Query: 61  cctgctactaatcagggatcatcacacatcaatatcaaagtcaatggcgtccaggaaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cctgctactaatcagggatcatcacacatcaatatcaaagtcaatggcgtccaggaaaag 212

                                                                       
Query: 121 attgaggctcggtttagaataaaaagaaacgtacaattgcggacactgatgaatttatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 attgaggctcggtttagaataaaaagaaacgtacaattgcggacactgatgaatttatat 272

                                                                       
Query: 181 tgtgatcactactctcaagattttaactcaattgctttcttatatgagggaaatttggtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tgtgatcactactctcaagattttaactcaattgctttcttatatgagggaaatttggtc 332

                                                                       
Query: 241 tccgcttatcaaacgcctgatgagctaaagatggaagacgaggacgagattgatgcaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tccgcttatcaaacgcctgatgagctaaagatggaagacgaggacgagattgatgcaatg 392

                                      
Query: 301 tcgcaccaaatgggaggtggattttaa 327
           |||||||||||||||||||||||||||
Sbjct: 393 tcgcaccaaatgggaggtggattttaa 419