Miyakogusa Predicted Gene
- Lj0g3v0319359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0319359.1 Non Chatacterized Hit- tr|K3XLM0|K3XLM0_SETIT
Uncharacterized protein OS=Setaria italica GN=Si002793,32.35,3e-19,no
description,Trigger factor, ribosome-binding, bacterial;
Trigger_N,Trigger factor, ribosome-bindi,CUFF.21642.1
(609 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82037 similar to UniRef100_A7QAR2 Cluster: Chromosome... 1126 0.0
gnl|LJGI|TC72007 similar to UniRef100_A7QAR2 Cluster: Chromosome... 716 0.0
gnl|LJGI|BP043475 283 6e-76
>gnl|LJGI|TC82037 similar to UniRef100_A7QAR2 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1130
Score = 1126 bits (568), Expect = 0.0
Identities = 598/609 (98%), Gaps = 8/609 (1%)
Strand = Plus / Plus
Query: 1 atgcagacaatatctcaaatcttcatcttaaatccaacaccacagatggccagatgcaag 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 215 atgcagacaatatctcaaatcttcatcttaaatccaacaccacaga--------tgcaag 266
Query: 61 cagagagtagatgagcttattttacctagcctgaattatagacgttttggtctttcgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cagagagtagatgagcttattttacctagcctgaattatagacgttttggtctttcgtgg 326
Query: 121 aagcttaggcatggtgcaaggaagatattaaaaagggaacaggcatatctccctgctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagcttaggcatggtgcaaggaagatattaaaaagggaacaggcatatctccctgctgcc 386
Query: 181 gttatatcagatgcccgagtttcttctactgattttgaggatttctcagtctctgttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttatatcagatgcccgagtttcttctactgattttgaggatttctcagtctctgttgct 446
Query: 241 gacaacaatgatgttagagaactaaagataagcatagaggtatctgggaacaaaacccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gacaacaatgatgttagagaactaaagataagcatagaggtatctgggaacaaaacccaa 506
Query: 301 agtatctttgatgatgtctttcggaaaatggttgcagcagcacaacctatcccaggattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agtatctttgatgatgtctttcggaaaatggttgcagcagcacaacctatcccaggattt 566
Query: 361 cgaagagtaaaaggaggaaaaacgcccgatattccaaaagagatcttattagaagtgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cgaagagtaaaaggaggaaaaacgcccgatattccaaaagagatcttattagaagtgctt 626
Query: 421 ggaccttccaaagtttataaggaagttatcaagaaaataatcaactcgactgtagctgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ggaccttccaaagtttataaggaagttatcaagaaaataatcaactcgactgtagctgag 686
Query: 481 tatgtggagaaggagagtttgatagttggcactgacttgagagttgagcaaaggtttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 687 tatgtggagaaggagagtttgatagttggcactgacttgagagttgagcaaagctttgaa 746
Query: 541 gattttgaaactacttttgaggaaggagaaaaattcagctttgatgttgtgcttcatcct 600
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 747 gatcttgaaactacttttgaggaaggagaaaaattcagctttgatgttgtgcctcatcct 806
Query: 601 caaaagtag 609
|||||||||
Sbjct: 807 caaaagtag 815
>gnl|LJGI|TC72007 similar to UniRef100_A7QAR2 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 577
Score = 716 bits (361), Expect = 0.0
Identities = 364/365 (99%)
Strand = Plus / Plus
Query: 1 atgcagacaatatctcaaatcttcatcttaaatccaacaccacagatggccagatgcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atgcagacaatatctcaaatcttcatcttaaatccaacaccacagatggccagatgcaag 272
Query: 61 cagagagtagatgagcttattttacctagcctgaattatagacgttttggtctttcgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cagagagtagatgagcttattttacctagcctgaattatagacgttttggtctttcgtgg 332
Query: 121 aagcttaggcatggtgcaaggaagatattaaaaagggaacaggcatatctccctgctgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aagcttaggcatggtgcaaggaagatattaaaaagggaacaggcatatctccctgctgcc 392
Query: 181 gttatatcagatgcccgagtttcttctactgattttgaggatttctcagtctctgttgct 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtcatatcagatgcccgagtttcttctactgattttgaggatttctcagtctctgttgct 452
Query: 241 gacaacaatgatgttagagaactaaagataagcatagaggtatctgggaacaaaacccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gacaacaatgatgttagagaactaaagataagcatagaggtatctgggaacaaaacccaa 512
Query: 301 agtatctttgatgatgtctttcggaaaatggttgcagcagcacaacctatcccaggattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agtatctttgatgatgtctttcggaaaatggttgcagcagcacaacctatcccaggattt 572
Query: 361 cgaag 365
|||||
Sbjct: 573 cgaag 577
>gnl|LJGI|BP043475
Length = 498
Score = 283 bits (143), Expect = 6e-76
Identities = 146/147 (99%)
Strand = Plus / Plus
Query: 44 agatggccagatgcaagcagagagtagatgagcttattttacctagcctgaattatagac 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatggccagatgcaagcagagagtagatgagcttattttacctagcctgaattatagac 60
Query: 104 gttttggtctttcgtggaagcttaggcatggtgcaaggaagatattaaaaagggaacagg 163
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtttgggtctttcgtggaagcttaggcatggtgcaaggaagatattaaaaagggaacagg 120
Query: 164 catatctccctgctgccgttatatcag 190
|||||||||||||||||||||||||||
Sbjct: 121 catatctccctgctgccgttatatcag 147
Score = 157 bits (79), Expect = 1e-37
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 189 agatgcccgagtttcttctactgattttgaggatttctcagtctctgttgctgacaacaa 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agatgcccgagtttcttctactgattttgaggatttctcagtctctgttgctgacaacaa 303
Query: 249 tgatgttagagaactaaag 267
|||||||||||||||||||
Sbjct: 304 tgatgttagagaactaaag 322