Miyakogusa Predicted Gene
- Lj0g3v0319309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0319309.1 tr|B9N5J1|B9N5J1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_837219 PE=4
SV=1,83.86,0,TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain; seg,NULL;
TPR-l,CUFF.21655.1
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80308 similar to UniRef100_Q9ZTK6 Cluster: Peroxisoma... 1128 0.0
gnl|LJGI|TC60012 similar to UniRef100_O81280 Cluster: Peroxisoma... 971 0.0
gnl|LJGI|GO006407 similar to UniRef100_A7QQG5 Cluster: Chromosom... 426 e-118
>gnl|LJGI|TC80308 similar to UniRef100_Q9ZTK6 Cluster: Peroxisomal targeting signal 1
receptor; n=2; Nicotiana tabacum|Rep: Peroxisomal
targeting signal 1 receptor - Nicotiana tabacum (Common
tobacco), partial (61%)
Length = 1827
Score = 1128 bits (569), Expect = 0.0
Identities = 575/577 (99%)
Strand = Plus / Plus
Query: 257 aaggacagcagcatggagcagttaatgatcagtgggttgatgaattctcaaagttgcatg 316
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1251 aaggacagcagcatggagcagttaatgatcagtgggctgatgaattctcaaagttgcatg 1310
Query: 317 ttaatgactgggctgaggaatttggtgatcaggttggtgaaggagctttaggggaatctg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 ttaatgactgggctgaggaatttggtgatcaggttggtgaaggagctttaggggaatctg 1370
Query: 377 ataattgggcacaggcatatgatgagttcctaaacgagcaagttgttgccaagcagcggt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 ataattgggcacaggcatatgatgagttcctaaacgagcaagttgttgccaagcagcggt 1430
Query: 437 tagatagttcaagcggtgtgtatgtcttctcagatttaaatccttatgttggtcatccaa 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1431 tagatagttcaagcggtgtgtatgtcttctcagatttaaatccttatgttggtcatccaa 1490
Query: 497 atccactaaaagaaggccaagatctcttcagaaaaggacttttaagtgaagcagttctag 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1491 atccactaaaagaaggccaagatctcttcagaaaaggacttttaagtgaagcagttctag 1550
Query: 557 cactggaagctgaagtcttgaaaaacccagaaaatgctgaagggtggagactacttggaa 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1551 cactggaagctgaagtcttgaaaaacccagaaaatgctgaagggtggagactacttggaa 1610
Query: 617 tagcacatgcagagaatgatgatgatcaacaggctattgcagcaatgatgcgtgcacagg 676
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1611 tagcacatgcagagaatgatgatgatcaacaggctattgcagcaatgatgcttgcacagg 1670
Query: 677 aggctgatcctacaaacttggaagtgcttcttgctcttggtgtcagtcatacaaatgaac 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1671 aggctgatcctacaaacttggaagtgcttcttgctcttggtgtcagtcatacaaatgaac 1730
Query: 737 tggagcaatcggctgctctgaaatatctttctggatggctacgtcatcacccgaaatacg 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1731 tggagcaatcggctgctctgaaatatctttctggatggctacgtcatcacccgaaatacg 1790
Query: 797 gaacacttgccccgcctgagatgtctgattcctcttt 833
|||||||||||||||||||||||||||||||||||||
Sbjct: 1791 gaacacttgccccgcctgagatgtctgattcctcttt 1827
Score = 424 bits (214), Expect = e-118
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 1 atgctcgcaaatacattggcccagaatgctgaccctaaattccagaactctaaattcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 atgctcgcaaatacattggcccagaatgctgaccctaaattccagaactctaaattcctt 1100
Query: 61 caatttgtctcaaagatgagccgtggtgagttgattattgatgacaatcaagttaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 caatttgtctcaaagatgagccgtggtgagttgattattgatgacaatcaagttaaagaa 1160
Query: 121 actgcattacctgcatctggagattgggccggagaataccaacagcaatataataatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 actgcattacctgcatctggagattgggccggagaataccaacagcaatataataatgat 1220
Query: 181 catggatgggctggtgaatatttaaataataagg 214
||||||||||||||||||||||||||||||||||
Sbjct: 1221 catggatgggctggtgaatatttaaataataagg 1254
>gnl|LJGI|TC60012 similar to UniRef100_O81280 Cluster: Peroxisomal targeting signal-1
receptor; n=1; Citrullus lanatus|Rep: Peroxisomal
targeting signal-1 receptor - Citrullus lanatus
(Watermelon) (Citrullus vulgaris), partial (25%)
Length = 1285
Score = 971 bits (490), Expect = 0.0
Identities = 500/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Plus
Query: 816 gatgtctgattcctctttgtactatgctgatgttgctagattatataatgaagcagctga 875
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gatgtctgattcctctt-gtactatgctgatgttgctagattatataatgaagcagctga 59
Query: 876 ggtctcacctaatgatgtagatgtccacatagttcttggggtcctgtataacttatccag 935
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 ggtctcacctgatgatgtagatgtccacatagttcttggggtcctgtataacttatccag 119
Query: 936 ggaatatgacaaagccattgcatcttttgaaagggcattgaaacttaagccacaggatta 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ggaatatgacaaagccattgcatcttttgaaagggcattgaaacttaagccacaggatta 179
Query: 996 ctctctctggaacaagcttggcgcaacacaagcaaacagtgttcaaagtgctgatgcaat 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctctctctggaacaagcttggcgcaacacaagcaaacagtgttcaaagtgctgatgcaat 239
Query: 1056 aatggcttaccagcaggcactagatttaaagcctaattatgttcgtgcttgggcaaatat 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aatggcttaccagcaggcactagatttaaagcctaattatgttcgtgcttgggcaaatat 299
Query: 1116 gggtatcagttatgcaaaccagggcatgtacgatgagtctattcgttattatgttcgggc 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gggtatcagttatgcaaaccagggcatgtacgatgagtctattcgttattatgttcgggc 359
Query: 1176 acttgccatgaatccaaaagcagagaacgcatggcaatatttgagaatttcattgagctg 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 acttgccatgaatccaaaagcagagaacgcatggcaatatttgagaatttcattgagctg 419
Query: 1236 tgcttccaggaatgacttgttggaagcttgtgatagtcgtaatctagaccttctccagaa 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgcttccaggaatgacttgttggaagcttgtgatagtcgtaatctagaccttctccagaa 479
Query: 1296 ggagtttcccctacagtaagtt 1317
||||||||||||||||||||||
Sbjct: 480 ggagtttcccctacagtaagtt 501
>gnl|LJGI|GO006407 similar to UniRef100_A7QQG5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (35%)
Length = 651
Score = 426 bits (215), Expect = e-118
Identities = 215/215 (100%)
Strand = Plus / Plus
Query: 1 atgctcgcaaatacattggcccagaatgctgaccctaaattccagaactctaaattcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atgctcgcaaatacattggcccagaatgctgaccctaaattccagaactctaaattcctt 438
Query: 61 caatttgtctcaaagatgagccgtggtgagttgattattgatgacaatcaagttaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caatttgtctcaaagatgagccgtggtgagttgattattgatgacaatcaagttaaagaa 498
Query: 121 actgcattacctgcatctggagattgggccggagaataccaacagcaatataataatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 actgcattacctgcatctggagattgggccggagaataccaacagcaatataataatgat 558
Query: 181 catggatgggctggtgaatatttaaataataaggt 215
|||||||||||||||||||||||||||||||||||
Sbjct: 559 catggatgggctggtgaatatttaaataataaggt 593