Miyakogusa Predicted Gene
- Lj0g3v0319299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0319299.1 tr|A8HNS4|A8HNS4_CHLRE Peroxisomal targeting
signal 1 receptor OS=Chlamydomonas reinhardtii GN=PEX5
,30.61,0.0000000000001,seg,NULL,CUFF.21651.1
(837 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80308 similar to UniRef100_Q9ZTK6 Cluster: Peroxisoma... 1659 0.0
gnl|LJGI|FS338402 similar to UniRef100_A7QQG5 Cluster: Chromosom... 1108 0.0
gnl|LJGI|GO006407 similar to UniRef100_A7QQG5 Cluster: Chromosom... 468 e-131
>gnl|LJGI|TC80308 similar to UniRef100_Q9ZTK6 Cluster: Peroxisomal targeting signal 1
receptor; n=2; Nicotiana tabacum|Rep: Peroxisomal
targeting signal 1 receptor - Nicotiana tabacum (Common
tobacco), partial (61%)
Length = 1827
Score = 1659 bits (837), Expect = 0.0
Identities = 837/837 (100%)
Strand = Plus / Plus
Query: 1 atggcgatgcgtgaccttatcactggcgccacagcttgccctgacccctccgcttcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atggcgatgcgtgaccttatcactggcgccacagcttgccctgacccctccgcttcttct 191
Query: 61 tcctccgccaaccctctcggcgctctcgccaacgtcctcgtcggttcttcctccaagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcctccgccaaccctctcggcgctctcgccaacgtcctcgtcggttcttcctccaagact 251
Query: 121 caggagaggctgaaggaaatccctacctccactcccactggccccgcttcccaattctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 caggagaggctgaaggaaatccctacctccactcccactggccccgcttcccaattctac 311
Query: 181 tcccagcctccgctccagcttcccggttccgaattcgataagcccttcctcgattccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tcccagcctccgctccagcttcccggttccgaattcgataagcccttcctcgattccaat 371
Query: 241 tctcagggttcggcgtttttgaatagttttaggtcggctggcgcgggcgggctcgaggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tctcagggttcggcgtttttgaatagttttaggtcggctggcgcgggcgggctcgaggaa 431
Query: 301 acgtgggatgagatacagcgtgagggaagggttggtcaaccctatgggagggtgccaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acgtgggatgagatacagcgtgagggaagggttggtcaaccctatgggagggtgccaccg 491
Query: 361 cctcaacagcttcatcaacctgcattggatgggacaccacaaagagttctatctagcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cctcaacagcttcatcaacctgcattggatgggacaccacaaagagttctatctagcttt 551
Query: 421 ttgcactcatttcttgatagcagccgtggtggaataccttttcatcctgcccctcttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ttgcactcatttcttgatagcagccgtggtggaataccttttcatcctgcccctcttcca 611
Query: 481 atgttgggtttatctgaaggtgataaacaatgcattcgtgaccgcagcagcataatggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 atgttgggtttatctgaaggtgataaacaatgcattcgtgaccgcagcagcataatggcg 671
Query: 541 aggcatctctttgcagataaaaatgaagagtttatcaatgcccaagtaaatgcacttcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aggcatctctttgcagataaaaatgaagagtttatcaatgcccaagtaaatgcacttcta 731
Query: 601 tgctctctagatattgacagtaatgtccgtggtaagggacctatgcctgaaagacttcgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tgctctctagatattgacagtaatgtccgtggtaagggacctatgcctgaaagacttcgg 791
Query: 661 gagcttgaggattactggaatgagtctcaaggcaaccggagacttggtgctcatcctgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 gagcttgaggattactggaatgagtctcaaggcaaccggagacttggtgctcatcctgca 851
Query: 721 gacggatggattacggaattcagtcaaaatagggaaagacatgataatcctgattcttgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 gacggatggattacggaattcagtcaaaatagggaaagacatgataatcctgattcttgg 911
Query: 781 gccaactcatttgagcaacagcacggtgcgaatggttgggcttctgaatttgaacat 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 gccaactcatttgagcaacagcacggtgcgaatggttgggcttctgaatttgaacat 968
>gnl|LJGI|FS338402 similar to UniRef100_A7QQG5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 728
Score = 1108 bits (559), Expect = 0.0
Identities = 559/559 (100%)
Strand = Plus / Plus
Query: 1 atggcgatgcgtgaccttatcactggcgccacagcttgccctgacccctccgcttcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atggcgatgcgtgaccttatcactggcgccacagcttgccctgacccctccgcttcttct 229
Query: 61 tcctccgccaaccctctcggcgctctcgccaacgtcctcgtcggttcttcctccaagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tcctccgccaaccctctcggcgctctcgccaacgtcctcgtcggttcttcctccaagact 289
Query: 121 caggagaggctgaaggaaatccctacctccactcccactggccccgcttcccaattctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 caggagaggctgaaggaaatccctacctccactcccactggccccgcttcccaattctac 349
Query: 181 tcccagcctccgctccagcttcccggttccgaattcgataagcccttcctcgattccaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcccagcctccgctccagcttcccggttccgaattcgataagcccttcctcgattccaat 409
Query: 241 tctcagggttcggcgtttttgaatagttttaggtcggctggcgcgggcgggctcgaggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tctcagggttcggcgtttttgaatagttttaggtcggctggcgcgggcgggctcgaggaa 469
Query: 301 acgtgggatgagatacagcgtgagggaagggttggtcaaccctatgggagggtgccaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acgtgggatgagatacagcgtgagggaagggttggtcaaccctatgggagggtgccaccg 529
Query: 361 cctcaacagcttcatcaacctgcattggatgggacaccacaaagagttctatctagcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cctcaacagcttcatcaacctgcattggatgggacaccacaaagagttctatctagcttt 589
Query: 421 ttgcactcatttcttgatagcagccgtggtggaataccttttcatcctgcccctcttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttgcactcatttcttgatagcagccgtggtggaataccttttcatcctgcccctcttcca 649
Query: 481 atgttgggtttatctgaaggtgataaacaatgcattcgtgaccgcagcagcataatggcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atgttgggtttatctgaaggtgataaacaatgcattcgtgaccgcagcagcataatggcg 709
Query: 541 aggcatctctttgcagata 559
|||||||||||||||||||
Sbjct: 710 aggcatctctttgcagata 728
>gnl|LJGI|GO006407 similar to UniRef100_A7QQG5 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (35%)
Length = 651
Score = 468 bits (236), Expect = e-131
Identities = 249/252 (98%), Gaps = 1/252 (0%)
Strand = Plus / Plus
Query: 586 gtaaatgcacttctatgctctctagatattgacagtaatgtccgtggtaagggacctatg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 gtaaatgcacttctatgctctctagatattgacagtaatgtccgtggtaagggacctatg 115
Query: 646 cctgaaagacttcgggagcttgaggattactggaatgagtctcaaggcaaccggagactt 705
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 116 cctgaaagacttcgggagcttgaggattactggaatgagtctcgaggcaaccagagactt 175
Query: 706 ggtgctcatcctgcagacggatggattacggaattcagtcaaaatagggaaagacatgat 765
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 176 ggtgctcatcctgcagacggatggattacggaattcagtcaaaatagggaaa-acatgat 234
Query: 766 aatcctgattcttgggccaactcatttgagcaacagcacggtgcgaatggttgggcttct 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aatcctgattcttgggccaactcatttgagcaacagcacggtgcgaatggttgggcttct 294
Query: 826 gaatttgaacat 837
||||||||||||
Sbjct: 295 gaatttgaacat 306