Miyakogusa Predicted Gene

Lj0g3v0318979.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0318979.1 tr|Q968Y0|Q968Y0_PLAFA Chloroquine resistance
marker protein OS=Plasmodium falciparum PE=4
SV=1,30,0.88,seg,NULL,CUFF.21604.1
         (421 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79288 homologue to UniRef100_Q4SGY4 Cluster: Chromoso...   369   e-102

>gnl|LJGI|TC79288 homologue to UniRef100_Q4SGY4 Cluster: Chromosome 14 SCAF14590,
           whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 14 SCAF14590, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (6%)
          Length = 468

 Score =  369 bits (186), Expect = e-102
 Identities = 186/186 (100%)
 Strand = Plus / Plus

                                                                       
Query: 236 agcgtccctcaaccctcttcactcaggtgattacccattgccctcacagtattacacaac 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 agcgtccctcaaccctcttcactcaggtgattacccattgccctcacagtattacacaac 209

                                                                       
Query: 296 cctcttcactcaaacactcagagtcacaattgatcaacagagccagaggacatagtcaaa 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cctcttcactcaaacactcagagtcacaattgatcaacagagccagaggacatagtcaaa 269

                                                                       
Query: 356 gaaagtttacctcagagagaaagagaaagagaaagggagcaattgattcgagtaggaagc 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaaagtttacctcagagagaaagagaaagagaaagggagcaattgattcgagtaggaagc 329

                 
Query: 416 cgtgaa 421
           ||||||
Sbjct: 330 cgtgaa 335