Miyakogusa Predicted Gene

Lj0g3v0318569.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0318569.1 Non Chatacterized Hit- tr|B9SDY5|B9SDY5_RICCO DNA
binding protein, putative OS=Ricinus communis
GN=R,62.48,0,Ribonuclease H-like,Ribonuclease H-like domain; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,CUFF.21565.1
         (2295 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62492 similar to UniRef100_A7Q8E6 Cluster: Chromosome...   801   0.0  

>gnl|LJGI|TC62492 similar to UniRef100_A7Q8E6 Cluster: Chromosome chr5 scaffold_64,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_64, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 738

 Score =  801 bits (404), Expect = 0.0
 Identities = 407/408 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1888 acatccagtgtgatgtcctgcaagagaaaccagattccttttgaacaaataatgaataca 1947
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    acatccagtgtgatgtcctgcaagagaaaccagattccttttgaacaaataatgaataca 61

                                                                        
Query: 1948 aggaattatatagagcgccaacatcttacggatcttgtctttgttcattccaacttacga 2007
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   aggaattatatagagcgccaacatcttacggatcttgtctttgttcattccaacttacga 121

                                                                        
Query: 2008 ttaagacaaatttatatgagtaaagaacaagattctagggatcccctgtcatttaatagc 2067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  ttaagacaaatttatatgagtaaagaacaagattctagggatcccctgtcatttaatagc 181

                                                                        
Query: 2068 attggtaatgttgaagactggatcaggccaagggatttggagttagaagagtatggtaac 2127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  attggtaatgttgaagactggatcaggccaagggatttggagttagaagagtatggtaac 241

                                                                        
Query: 2128 tcggactggatggaactggatccatcttctgttaacacaatgcttttacagcctttgaat 2187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242  tcggactggatggaactggatccatcttctgttaacacaatgcttttacagcctttgaat 301

                                                                        
Query: 2188 gatgaagctgaagagttgggtgaagggtttgatgatcatgaaattttcagtagtcaggaa 2247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302  gatgaagctgaagagttgggtgaagggtttgatgatcatgaaattttcagtagtcaggaa 361

                                                            
Query: 2248 gacgatgaagatgataacactggagataagttggcaattagcgaatga 2295
            |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 362  gacgatgaagatgaaaacactggagataagttggcaattagcgaatga 409