Miyakogusa Predicted Gene

Lj0g3v0318559.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0318559.1 Non Chatacterized Hit- tr|I3SWD9|I3SWD9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,DYNEIN_LIGHT_1,Dynein light chain, type 1/2, conserved
site; no description,Dynein light chain, type,CUFF.21564.1
         (432 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65049 homologue to UniRef100_A7Y7E9 Cluster: Dynein l...   856   0.0  
gnl|LJGI|TC65836 homologue to UniRef100_A7Y7E9 Cluster: Dynein l...   285   1e-76
gnl|LJGI|BW617497 similar to UniRef100_A7NUB4 Cluster: Chromosom...   230   6e-60

>gnl|LJGI|TC65049 homologue to UniRef100_A7Y7E9 Cluster: Dynein light chain; n=1;
           Lupinus albus|Rep: Dynein light chain - Lupinus albus
           (White lupin), partial (79%)
          Length = 659

 Score =  856 bits (432), Expect = 0.0
 Identities = 432/432 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcagcgacgaggccaggaggaacagcgtcgtcgttggtggcggaggaggaggagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36  atgagcagcgacgaggccaggaggaacagcgtcgtcgttggtggcggaggaggaggagga 95

                                                                       
Query: 61  gcaccaccacttcttacggcgagacccaactccgaagatcgaaagccaatgctctcctct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  gcaccaccacttcttacggcgagacccaactccgaagatcgaaagccaatgctctcctct 155

                                                                       
Query: 121 ttatccccaccaccgccgccacaaacaccatctgctgctcccgcacccaagaaagtcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ttatccccaccaccgccgccacaaacaccatctgctgctcccgcacccaagaaagtcatc 215

                                                                       
Query: 181 atcaagagtgctgatatgctccctgacatgcagaaagaggccgttgatatcgccgtcgcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atcaagagtgctgatatgctccctgacatgcagaaagaggccgttgatatcgccgtcgcg 275

                                                                       
Query: 241 gcatttgagaggctcaatgtggagaaagatgttgctgagcatatcaagaaggagttcgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gcatttgagaggctcaatgtggagaaagatgttgctgagcatatcaagaaggagttcgat 335

                                                                       
Query: 301 aagaggcatggacccacttggcattgcatagttggtcgcaatttcggttcgtatgtgact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aagaggcatggacccacttggcattgcatagttggtcgcaatttcggttcgtatgtgact 395

                                                                       
Query: 361 catgaaacaaaccactttgtgtatttctatttggatcagaaagcggttttacttttcaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 catgaaacaaaccactttgtgtatttctatttggatcagaaagcggttttacttttcaag 455

                       
Query: 421 tctggctagcca 432
           ||||||||||||
Sbjct: 456 tctggctagcca 467


>gnl|LJGI|TC65836 homologue to UniRef100_A7Y7E9 Cluster: Dynein light chain; n=1;
           Lupinus albus|Rep: Dynein light chain - Lupinus albus
           (White lupin), partial (72%)
          Length = 916

 Score =  285 bits (144), Expect = 1e-76
 Identities = 234/264 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 ccaagaaagtcatcatcaagagtgctgatatgctccctgacatgcagaaagaggccgttg 226
           |||||||| |||||||||||||||| || ||| | || |||||||| |||||||| || |
Sbjct: 303 ccaagaaaatcatcatcaagagtgccgacatgttgcccgacatgcaaaaagaggctgtcg 362

                                                                       
Query: 227 atatcgccgtcgcggcatttgagaggctcaatgtggagaaagatgttgctgagcatatca 286
           || ||||||||  ||| ||||||| |  |||||||||||| |||||||||||||| || |
Sbjct: 363 atgtcgccgtcaaggcgtttgagaagtacaatgtggagaaggatgttgctgagcagataa 422

                                                                       
Query: 287 agaaggagttcgataagaggcatggacccacttggcattgcatagttggtcgcaatttcg 346
           ||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||
Sbjct: 423 agaaggagttcgataagaggcatggtcccacttggcattgcatcgttggtcgtaatttcg 482

                                                                       
Query: 347 gttcgtatgtgactcatgaaacaaaccactttgtgtatttctatttggatcagaaagcgg 406
           | || |||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 483 gctcatatgtgactcatgaaacaaaccacttcgtttacttctatttggatcagaaagcgg 542

                                   
Query: 407 ttttacttttcaagtctggctagc 430
           | |||||||| || ||||||||||
Sbjct: 543 tcttactttttaaatctggctagc 566


>gnl|LJGI|BW617497 similar to UniRef100_A7NUB4 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 462

 Score =  230 bits (116), Expect = 6e-60
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 53  gaggaggagcaccaccacttcttacggcgagacccaactccgaagatcgaaagccaatgc 112
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaggaggagcaccaccacttcttacggcgagacccaactccgaagatcgaaagccaatgc 406

                                                                   
Query: 113 tctcctctttatccccaccaccgccgccacaaacaccatctgctgctcccgcaccc 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tctcctctttatccccaccaccgccgccacaaacaccatctgctgctcccgcaccc 462