Miyakogusa Predicted Gene

Lj0g3v0318429.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0318429.1 Non Chatacterized Hit- tr|D7M307|D7M307_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,63.38,3e-18,UNCHARACTERIZED,Vesicle transport protein,
SFT2-like; Got1,Vesicle transport protein,
Got1/SFT2-like,gene.g24779.t1.1
         (219 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61171 similar to UniRef100_A7QR21 Cluster: Chromosome...   434   e-122

>gnl|LJGI|TC61171 similar to UniRef100_A7QR21 Cluster: Chromosome undetermined
           scaffold_147, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_147,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (86%)
          Length = 747

 Score =  434 bits (219), Expect = e-122
 Identities = 219/219 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgcttgatcctgttcggatctatgcaacagccatatacattgcaagtatgataatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgatgcttgatcctgttcggatctatgcaacagccatatacattgcaagtatgataatt 480

                                                                       
Query: 61  gccttgttttgtgctctttatgttcataacaagctactgacgcttcttgcaattatcttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccttgttttgtgctctttatgttcataacaagctactgacgcttcttgcaattatcttg 540

                                                                       
Query: 121 gagtttggcgcactagtttggtatagcttgagctacatcccttttgcgaggtccatggtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagtttggcgcactagtttggtatagcttgagctacatcccttttgcgaggtccatggtt 600

                                                  
Query: 181 tcaaagatcatggtttcatgctttgacacagaattttag 219
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaaagatcatggtttcatgctttgacacagaattttag 639