Miyakogusa Predicted Gene

Lj0g3v0318309.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0318309.1 tr|G7L125|G7L125_MEDTR Regulation of nuclear
pre-mRNA domain-containing protein 1B OS=Medicago trunc,76.49,0,no
description,RNA polymerase II, large subunit, CTD; CID,RNA polymerase
II, large subunit, CTD; no ,CUFF.21626.1
         (1545 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81431 similar to UniRef100_A7PL45 Cluster: Chromosome...    56   7e-07

>gnl|LJGI|TC81431 similar to UniRef100_A7PL45 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (37%)
          Length = 792

 Score = 56.0 bits (28), Expect = 7e-07
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 179 ttctgtatcttgcaaatgatatcttacagaacagca 214
           ||||||||||||||||||| ||||| ||||||||||
Sbjct: 434 ttctgtatcttgcaaatgacatcttgcagaacagca 469