Miyakogusa Predicted Gene
- Lj0g3v0318139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0318139.1 tr|G7KN01|G7KN01_MEDTR STAM-binding protein
OS=Medicago truncatula GN=MTR_6g083940 PE=4
SV=1,82.5,0.0000000003,seg,NULL,CUFF.21549.1
(540 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596315 similar to UniRef100_A7PGV7 Cluster: Chromosom... 793 0.0
gnl|LJGI|TC74148 similar to UniRef100_A7PGV7 Cluster: Chromosome... 527 e-149
gnl|LJGI|DC594718 similar to UniRef100_A7PGV7 Cluster: Chromosom... 464 e-130
gnl|LJGI|TC66605 similar to UniRef100_A7PGV7 Cluster: Chromosome... 212 2e-54
gnl|LJGI|TC63457 similar to UniRef100_A7PGV7 Cluster: Chromosome... 212 2e-54
gnl|LJGI|TC74141 similar to UniRef100_A7PGN6 Cluster: Chromosome... 111 5e-24
gnl|LJGI|FS319290 similar to UniRef100_Q29A33 Cluster: Ataxin-2 ... 56 2e-07
gnl|LJGI|TC74794 homologue to UniRef100_Q4W8C1 Cluster: Gibberel... 52 4e-06
>gnl|LJGI|DC596315 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 575
Score = 793 bits (400), Expect = 0.0
Identities = 443/461 (96%), Gaps = 16/461 (3%)
Strand = Plus / Plus
Query: 1 atgacttcttcttcttcttcgggcacgatcaacatcgctgcaagtgctcagaaactcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgacttcttcttcttcttcgggcacgatcaacatcgctgcaagtgctcagaaactcgat 190
Query: 61 gtcgataaccgaatcgctctctgtttctacttccggatcgccgataacatcctccgtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gtcgataaccgaatcgctctctgtttctacttccggatcgccgataacatcctccgtcaa 250
Query: 121 gctctatcaccacatcgcatcagagcgaccatcgctccatctccatcgcagccacactcc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 251 gctctatcaccacatcgcatcagagcaaccatcgctccatctccatcgcagccacactcc 310
Query: 181 accgcaagcagctgtgcttccagatccagcaaattctcctggttcacgatactcaccgga 240
|||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 311 accgca----------------gatccagcaaattctccttgttcacgatactcaccgga 354
Query: 241 gaagaaaccctagatccgcgatgctacatgtccgacacctccataattccactccggcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gaagaaaccctagatccgcgatgctacatgtccgacacctccataattccactccggcta 414
Query: 301 ccaccaggtggcgcaacaagctcgagaggtcgcgtttcttgcctttcttcttctgattcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ccaccaggtggcgcaacaagctcgagaggtcgcgtttcttgcctttcttcttctgattcg 474
Query: 361 atcttgtttcttacccgcaggtacactgaattggaaattgcggtgtcggagataggaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atcttgtttcttacccgcaggtacactgaattggaaattgcggtgtcggagataggaatt 534
Query: 421 gtagggctgaacgcggagaatttagggattggaggtgtttg 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gtagggctgaacgcggagaatttagggattggaggtgtttg 575
>gnl|LJGI|TC74148 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 469
Score = 527 bits (266), Expect = e-149
Identities = 272/274 (99%)
Strand = Plus / Plus
Query: 1 atgacttcttcttcttcttcgggcacgatcaacatcgctgcaagtgctcagaaactcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atgacttcttcttcttcttcgggcacgatcaacatcgctgcaagtgctcagaaactcgat 255
Query: 61 gtcgataaccgaatcgctctctgtttctacttccggatcgccgataacatcctccgtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtcgataaccgaatcgctctctgtttctacttccggatcgccgataacatcctccgtcaa 315
Query: 121 gctctatcaccacatcgcatcagagcgaccatcgctccatctccatcgcagccacactcc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 316 gctctatcaccacatcgcatcagagcaaccatcgctccatctccatcgcagccacactcc 375
Query: 181 accgcaagcagctgtgcttccagatccagcaaattctcctggttcacgatactcaccgga 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 376 accgcaagcagctgtgcttccagatccagcaaattctccttgttcacgatactcaccgga 435
Query: 241 gaagaaaccctagatccgcgatgctacatgtccg 274
||||||||||||||||||||||||||||||||||
Sbjct: 436 gaagaaaccctagatccgcgatgctacatgtccg 469
>gnl|LJGI|DC594718 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 469
Score = 464 bits (234), Expect = e-130
Identities = 244/246 (99%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 30 caacatcgctgcaagtgctcagaaactcgatgtcgataaccgaatcgctctctgtttcta 89
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 caacaacgctgcaagtgctcagaaactcgatgtcgataaccgaatcgctctctgtttcta 284
Query: 90 cttccggatcgccgataacatcctccgtcaagctctatcaccacatcgcatcagagcgac 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cttccggatcgccgataacatcctccgtcaagctctatcaccacatcgcatcagagcgac 344
Query: 150 catcgctccatctccatcgcagccacactccaccgcaagcagctgtgcttccagatccag 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 catcgctccatctccatcgcagccacactccaccgcaagcagctgtgcttccagatccag 404
Query: 210 caaattctcctggttcacgatactcaccggagaagaaaccctagatccgcgatgctacat 269
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 405 caaattctcctggttcacgatactcaccggagaag-aaccctagatccgcgatgctacat 463
Query: 270 gtccga 275
||||||
Sbjct: 464 gtccga 469
>gnl|LJGI|TC66605 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 2050
Score = 212 bits (107), Expect = 2e-54
Identities = 113/115 (98%)
Strand = Plus / Plus
Query: 5 cttcttcttcttcttcgggcacgatcaacatcgctgcaagtgctcagaaactcgatgtcg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 cttcttcttcttctttgggcacgatcaacatcgctgcaagtgctcagaaactcgatgtcg 163
Query: 65 ataaccgaatcgctctctgtttctacttccggatcgccgataacatcctccgtca 119
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 164 ataaccgaatcgctctccgtttctacttccggatcgccgataacatcctccgtca 218
>gnl|LJGI|TC63457 similar to UniRef100_A7PGV7 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 752
Score = 212 bits (107), Expect = 2e-54
Identities = 113/115 (98%)
Strand = Plus / Plus
Query: 5 cttcttcttcttcttcgggcacgatcaacatcgctgcaagtgctcagaaactcgatgtcg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cttcttcttcttctttgggcacgatcaacatcgctgcaagtgctcagaaactcgatgtcg 220
Query: 65 ataaccgaatcgctctctgtttctacttccggatcgccgataacatcctccgtca 119
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 221 ataaccgaatcgctctccgtttctacttccggatcgccgataacatcctccgtca 275
>gnl|LJGI|TC74141 similar to UniRef100_A7PGN6 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 585
Score = 111 bits (56), Expect = 5e-24
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 380 ggtacactgaattggaaattgcggtgtcggagataggaattgtagggctgaacgcggaga 439
|||||||||||||| |||| ||||| ||||||| ||||| ||||||||| |||||||||
Sbjct: 172 ggtacactgaattgaaaatcgcggtaccggagatcggaatcgtagggctgcacgcggaga 231
Query: 440 atttagggattggaggtgtttgggttga 467
|| |||||||||||||||||||||||||
Sbjct: 232 atctagggattggaggtgtttgggttga 259
>gnl|LJGI|FS319290 similar to UniRef100_Q29A33 Cluster: Ataxin-2 homolog; n=1;
Drosophila pseudoobscura|Rep: Ataxin-2 homolog -
Drosophila, partial (1%)
Length = 601
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 143 gagcgaccatcgctccatctccatcgcagccacactccac 182
||||||||| | ||||||||||||||||||||||| ||||
Sbjct: 83 gagcgaccaccactccatctccatcgcagccacacaccac 122
>gnl|LJGI|TC74794 homologue to UniRef100_Q4W8C1 Cluster: Gibberellin 2-oxidase; n=1;
Vigna angularis|Rep: Gibberellin 2-oxidase - Phaseolus
angularis (Adzuki bean) (Vigna angularis), partial (5%)
Length = 520
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 511 tggataaaggttgataagggatattgaaag 540
||||| ||||||||||||||||||||||||
Sbjct: 1 tggatgaaggttgataagggatattgaaag 30