Miyakogusa Predicted Gene

Lj0g3v0317529.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0317529.1 tr|Q109L1|Q109L1_ORYSJ PsbP family protein,
expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os10g32,39.78,3e-19,PsbP,Photosystem II PsbP, oxygen evolving
complex; no description,Mog1/PsbP, alpha/beta/alpha
sandwi,CUFF.21478.1
         (294 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62589 similar to UniRef100_A7PJ08 Cluster: Chromosome...   575   e-164
gnl|LJGI|GO025183 weakly similar to UniRef100_A7PJ08 Cluster: Ch...   165   2e-40

>gnl|LJGI|TC62589 similar to UniRef100_A7PJ08 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (81%)
          Length = 703

 Score =  575 bits (290), Expect = e-164
 Identities = 293/294 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtccaatagaagaggttgttcccaatttggtgaaacataaatattcaacgccaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atgggtccaatagaagaggttgttcccaatttggtgaaacataaatattcaacgccaacc 378

                                                                       
Query: 61  caaatctcaacaatatatgacatgcaggagaaaaatatagatggaaaacattactataca 120
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 caaatctcaacaatatatgacatgcaggagaaaaatattgatggaaaacattactataca 438

                                                                       
Query: 121 tttgaatatgtacttacatcaccaaatttctctagtgcctcctttacaacagttgctata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttgaatatgtacttacatcaccaaatttctctagtgcctcctttacaacagttgctata 498

                                                                       
Query: 181 ggaaatggaaggtactacacattaattgtgggagccaatgaaaggagatggaaaagagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggaaatggaaggtactacacattaattgtgggagccaatgaaaggagatggaaaagagta 558

                                                                 
Query: 241 cgaaatcagcttaaagtggtagcagactcctttaggctccttgacatttgatat 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cgaaatcagcttaaagtggtagcagactcctttaggctccttgacatttgatat 612


>gnl|LJGI|GO025183 weakly similar to UniRef100_A7PJ08 Cluster: Chromosome chr13
           scaffold_17, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (52%)
          Length = 534

 Score =  165 bits (83), Expect = 2e-40
 Identities = 83/83 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtccaatagaagaggttgttcccaatttggtgaaacataaatattcaacgccaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgggtccaatagaagaggttgttcccaatttggtgaaacataaatattcaacgccaacc 511

                                  
Query: 61  caaatctcaacaatatatgacat 83
           |||||||||||||||||||||||
Sbjct: 512 caaatctcaacaatatatgacat 534