Miyakogusa Predicted Gene
- Lj0g3v0317519.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0317519.1 tr|B5YNR2|B5YNR2_THAPS Predicted protein
(Fragment) OS=Thalassiosira pseudonana GN=THAPS_35685 PE=4
,40.16,2e-19,CS,CS-like domain; no description,NULL; coiled-coil,NULL;
CS,CS domain; HSP20-like chaperones,HSP20-,CUFF.21477.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62997 similar to UniRef100_Q8W065 Cluster: Nuclear mo... 767 0.0
gnl|LJGI|TC59642 similar to UniRef100_Q8W065 Cluster: Nuclear mo... 767 0.0
gnl|LJGI|TC58762 similar to UniRef100_Q8W065 Cluster: Nuclear mo... 767 0.0
>gnl|LJGI|TC62997 similar to UniRef100_Q8W065 Cluster: Nuclear movement protein-like;
n=2; Oryza sativa|Rep: Nuclear movement protein-like -
Oryza sativa subsp. japonica (Rice), complete
Length = 797
Score = 767 bits (387), Expect = 0.0
Identities = 390/391 (99%)
Strand = Plus / Plus
Query: 1 atggcggagaaattggcccccgaaaagcgtcacatcttcctccacaacggtcaaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atggcggagaaattggcccccgaaaagcgtcacatcttcctccacaacggtcaaaaagtg 207
Query: 61 ttcgagtgggatcaaaccctagatgaaatcaatatttacatcaatcttcctcccaatgtt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 208 ttcgagtgggatcaaaccctagatgaaatcaatatttacaccaatcttcctcccaatgtt 267
Query: 121 cattccaagcaattctactataagattcagtccaagcacatcgaacttggaatcaaaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cattccaagcaattctactataagattcagtccaagcacatcgaacttggaatcaaaggc 327
Query: 181 aatcctccgtatctcaaccatgattttactagcccggtgaagacagattcttcattttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aatcctccgtatctcaaccatgattttactagcccggtgaagacagattcttcattttgg 387
Query: 241 accttagaggatgatataatgcacgtcacgctgcaaaagagagacaagggtcagacatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 accttagaggatgatataatgcacgtcacgctgcaaaagagagacaagggtcagacatgg 447
Query: 301 gcttctcccatattaggtcagggtcagctggatgcttacactactgatattgaacagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gcttctcccatattaggtcagggtcagctggatgcttacactactgatattgaacagaag 507
Query: 361 cgcctcatgcttcagagatttcaggaggaga 391
|||||||||||||||||||||||||||||||
Sbjct: 508 cgcctcatgcttcagagatttcaggaggaga 538
>gnl|LJGI|TC59642 similar to UniRef100_Q8W065 Cluster: Nuclear movement protein-like;
n=2; Oryza sativa|Rep: Nuclear movement protein-like -
Oryza sativa subsp. japonica (Rice), complete
Length = 887
Score = 767 bits (387), Expect = 0.0
Identities = 390/391 (99%)
Strand = Plus / Plus
Query: 1 atggcggagaaattggcccccgaaaagcgtcacatcttcctccacaacggtcaaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atggcggagaaattggcccccgaaaagcgtcacatcttcctccacaacggtcaaaaagtg 145
Query: 61 ttcgagtgggatcaaaccctagatgaaatcaatatttacatcaatcttcctcccaatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttcgagtgggatcaaaccctagatgaaatcaatatttacatcaatcttcctcccaatgtt 205
Query: 121 cattccaagcaattctactataagattcagtccaagcacatcgaacttggaatcaaaggc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cattccaagcaattctactgtaagattcagtccaagcacatcgaacttggaatcaaaggc 265
Query: 181 aatcctccgtatctcaaccatgattttactagcccggtgaagacagattcttcattttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aatcctccgtatctcaaccatgattttactagcccggtgaagacagattcttcattttgg 325
Query: 241 accttagaggatgatataatgcacgtcacgctgcaaaagagagacaagggtcagacatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 accttagaggatgatataatgcacgtcacgctgcaaaagagagacaagggtcagacatgg 385
Query: 301 gcttctcccatattaggtcagggtcagctggatgcttacactactgatattgaacagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gcttctcccatattaggtcagggtcagctggatgcttacactactgatattgaacagaag 445
Query: 361 cgcctcatgcttcagagatttcaggaggaga 391
|||||||||||||||||||||||||||||||
Sbjct: 446 cgcctcatgcttcagagatttcaggaggaga 476
>gnl|LJGI|TC58762 similar to UniRef100_Q8W065 Cluster: Nuclear movement protein-like;
n=2; Oryza sativa|Rep: Nuclear movement protein-like -
Oryza sativa subsp. japonica (Rice), complete
Length = 797
Score = 767 bits (387), Expect = 0.0
Identities = 390/391 (99%)
Strand = Plus / Plus
Query: 1 atggcggagaaattggcccccgaaaagcgtcacatcttcctccacaacggtcaaaaagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggcggagaaattggcccccgaaaagcgtcacatcttcctccacaacggtcaaaaagtg 199
Query: 61 ttcgagtgggatcaaaccctagatgaaatcaatatttacatcaatcttcctcccaatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttcgagtgggatcaaaccctagatgaaatcaatatttacatcaatcttcctcccaatgtt 259
Query: 121 cattccaagcaattctactataagattcagtccaagcacatcgaacttggaatcaaaggc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cattccaagcaattctactgtaagattcagtccaagcacatcgaacttggaatcaaaggc 319
Query: 181 aatcctccgtatctcaaccatgattttactagcccggtgaagacagattcttcattttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatcctccgtatctcaaccatgattttactagcccggtgaagacagattcttcattttgg 379
Query: 241 accttagaggatgatataatgcacgtcacgctgcaaaagagagacaagggtcagacatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 accttagaggatgatataatgcacgtcacgctgcaaaagagagacaagggtcagacatgg 439
Query: 301 gcttctcccatattaggtcagggtcagctggatgcttacactactgatattgaacagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcttctcccatattaggtcagggtcagctggatgcttacactactgatattgaacagaag 499
Query: 361 cgcctcatgcttcagagatttcaggaggaga 391
|||||||||||||||||||||||||||||||
Sbjct: 500 cgcctcatgcttcagagatttcaggaggaga 530