Miyakogusa Predicted Gene
- Lj0g3v0317239.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0317239.1 tr|I1IQC3|I1IQC3_BRADI Pectinesterase
OS=Brachypodium distachyon GN=BRADI4G30980 PE=3 SV=1,28.99,1e-18,Plant
invertase/pectin methylesterase inhibi,Pectinesterase inhibitor;
SUBFAMILY NOT NAMED,NULL; FAM,gene.g24702.t1.1
(762 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS339092 similar to UniRef100_A7Q8F9 Cluster: Chromosom... 997 0.0
gnl|LJGI|FS340033 similar to UniRef100_A8DYM0 Cluster: CG11206-P... 72 6e-12
gnl|LJGI|TC74004 similar to UniRef100_Q9SWV4 Cluster: ER66 prote... 58 8e-08
gnl|LJGI|TC61814 similar to UniRef100_Q0G582 Cluster: SAM (And s... 58 8e-08
>gnl|LJGI|FS339092 similar to UniRef100_A7Q8F9 Cluster: Chromosome chr5 scaffold_64,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_64, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 808
Score = 997 bits (503), Expect = 0.0
Identities = 598/629 (95%), Gaps = 3/629 (0%)
Strand = Plus / Plus
Query: 5 gcgtgaataagagtgaagcaaacaatgatatagaagacaccatgaagaaccatgttgcta 64
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 180 gcgtgaacaagagtgaagcaaacaatgatatagaagacaacatgaagaaccatgttgcta 239
Query: 65 ccacggtaaaagcagtccaaaccctttgccatcccactgattacaagaaagaatgtgagg 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 ccacggtaaaagcagtccaaaccctttgccatcccactgattacaaggaagaatgtgagg 299
Query: 125 aaaccttgatagcagaggctggaaacaccactgacccaaaagaacttactaaaattgcct 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 300 aaaccttgatagcagaggctggaaacaccactgacccaaaagaacttgtaaaaattgcct 359
Query: 185 tcaacattacaattaacaaaattggtgacaagctcaaggaaactgagttgttgcatgagg 244
||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 360 tcaacattacaatcaagaaaattggtgacaaactcaaggaaactgagttgttgcatgagg 419
Query: 245 ttgagaaggatccaagagccaagatggcacttgacacatgtaaacaactcatggatcttt 304
||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 420 ttgagaaggatccaagagccaagatggcactagacacatgcaaacaacttatggatcttt 479
Query: 305 caattggggagttaacaaggtcagttgatggaatagacgagtttcatctcaacaatctgg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 480 caattggggagttaacaaggtcagttgatggaatagacgagtttcatctcaacaatttgg 539
Query: 365 acaaaattctcatgaatgtaaaggtttggcttagcggcgcagtcacataccaagatacat 424
|||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 540 acaaaattctcatgaatgtaaaggtttggcttagtggtgctgtcacataccaagatacat 599
Query: 425 gcttggatgggtttgagaacaccacaagcgaagccgggacgaatatgaaggagctattaa 484
||||||||||||||||||||||||| ||||||| |||| ||| ||||||||||||||||
Sbjct: 600 gcttggatgggtttgagaacaccactagcgaagttgggatgaagatgaaggagctattaa 659
Query: 485 caacaagcatgcatatgagtagcaatgccctggctattgtctctgaacttgctgacacca 544
|||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||
Sbjct: 660 caacaagcatgcatatgagtagtaatgccttggctattgtctcggaacttgctgacacca 719
Query: 545 tatcagattggaatgtcacaaagttaaccggg---cgccgcctccttcaagattctaaga 601
|||||||||||||||||||||||||||||||| |||| ||||||||| ||||||| ||
Sbjct: 720 tatcagattggaatgtcacaaagttaaccgggcgacgcctcctccttcaggattctagga 779
Query: 602 ccccctcatgggttgatcttggtcatcgt 630
| |||||||||||||||||||||||||||
Sbjct: 780 ctccctcatgggttgatcttggtcatcgt 808
>gnl|LJGI|FS340033 similar to UniRef100_A8DYM0 Cluster: CG11206-PC isoform C; n=2;
Drosophila melanogaster|Rep: CG11206-PC isoform C -,
partial (1%)
Length = 782
Score = 71.9 bits (36), Expect = 6e-12
Identities = 43/44 (97%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 682 gaattagatttcccaccctctgttttagatttcccaccccattt 725
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 736 gaattagatttcccaccc-ctgttttagatttcccaccccattt 778
>gnl|LJGI|TC74004 similar to UniRef100_Q9SWV4 Cluster: ER66 protein; n=1; Solanum
lycopersicum|Rep: ER66 protein - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (27%)
Length = 1169
Score = 58.0 bits (29), Expect = 8e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 680 gggaattagatttcccaccctctgttttagatttcccaccc 720
|||||||||||||||||||| |||||||||| || ||||||
Sbjct: 791 gggaattagatttcccaccccctgttttagaattgccaccc 831
>gnl|LJGI|TC61814 similar to UniRef100_Q0G582 Cluster: SAM (And some other
nucleotide) binding motif:Site-specific DNA-
methyltransferase (Cytosine-N4-specific):N-6; n=1;
Fulvimarina pelagi HTCC2506|Rep: SAM (And some other
nucleotide) binding motif:Site-specific DNA-
methyltransferase (Cytosine-N4-specific):N-6 -
Fulvimarina pelagi HTCC2506, partial (5%)
Length = 1192
Score = 58.0 bits (29), Expect = 8e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 680 gggaattagatttcccaccctctgttttagatttcccaccc 720
|||||||||||||||||||| |||||||||| || ||||||
Sbjct: 893 gggaattagatttcccaccccctgttttagaattgccaccc 933