Miyakogusa Predicted Gene
- Lj0g3v0317209.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0317209.3 Non Chatacterized Hit- tr|I1HT42|I1HT42_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,27.79,4e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL,CUFF.21461.3
(1470 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011512 weakly similar to UniRef100_A7NZD5 Cluster: Ch... 743 0.0
gnl|LJGI|FS330405 weakly similar to UniRef100_A7NZD5 Cluster: Ch... 133 3e-30
gnl|LJGI|TC65006 weakly similar to UniRef100_A7NZD5 Cluster: Chr... 133 3e-30
gnl|LJGI|TC65643 similar to UniRef100_A7NZD5 Cluster: Chromosome... 64 3e-09
>gnl|LJGI|GO011512 weakly similar to UniRef100_A7NZD5 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 712
Score = 743 bits (375), Expect = 0.0
Identities = 387/391 (98%)
Strand = Plus / Plus
Query: 1080 gaaggcaaacctgatggataaggaaaccgagttgcagggtattgtggaggagaatgagaa 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaaggcaaacctgatggataaggaaaccgagttgcagggtattgtggaggagaatgagaa 61
Query: 1140 gctgaatttgaagcttgaaaagagcattgcaaaacatagtaggttgaatgagtgtgtggc 1199
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gctgaatttgaagtttgaaaagagcattgcaaaacatagtaggttgaatgagtgtgtggc 121
Query: 1200 agagctgaatagtgatctgattaagaaggagagagaactacaaagtatatctcaagataa 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agagctgaatagtgatctgattaagaaggagagagaactacaaagtatatctcaagataa 181
Query: 1260 tgaaatgctgaagatggaaatcaatgaggctgtgatgaaacttgagcttgtgacagctga 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgaaatgctgaagatggaaatcaatgaggctgtgatgaaacttgagcttgtgacagctga 241
Query: 1320 ggcagaggggagcaagcagaatgctgagcgattggctgagaagcttgaagtggtacaagc 1379
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 242 ggcagaggggagcaagcagaatgctgagcgtttggctgagaagcttgaagtggtacaagc 301
Query: 1380 agctatgtctgaaacagacgcagaagtgagaaggctgagggtgcaatctgatcaatggag 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agctatgtctgaaacagacgcagaagtgagaaggctgagggtgcaatctgatcaatggag 361
Query: 1440 gaaggctgcagaagcggctgctgctacaatt 1470
||||||||||||||||||||| ||||||||
Sbjct: 362 gaaggctgcagaagcggctgccactacaatt 392
>gnl|LJGI|FS330405 weakly similar to UniRef100_A7NZD5 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 760
Score = 133 bits (67), Expect = 3e-30
Identities = 160/191 (83%)
Strand = Plus / Plus
Query: 142 agaagccccaaagtcattgagcgaaaatcaccaagaagtcttgtcccagagaggaaacgc 201
|||||||||||| ||| ||| |||| |||||||||||| | || || |||||||| |||
Sbjct: 468 agaagccccaaaatcactgaccgaagatcaccaagaagcccagttcctgagaggaagcgc 527
Query: 202 cctagcagaatatctgaattggaatctcagatttctcaactgaaaggggatttgaagaag 261
|| || ||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||
Sbjct: 528 cccagtagaatatctgaattggaatctcaaatttctcaacttcaagatgatctgaagaag 587
Query: 262 gtgaaggaccagctcaatttttctgagttgtccaagaagcaagctcagcaagatgctaag 321
|||| ||||||||| | | | |||| | | ||||||||||||||||||||||||| |
Sbjct: 588 gtgagggaccagcttattctaactgaatcatgcaagaagcaagctcagcaagatgctcaa 647
Query: 322 gagtccaagga 332
|| ||||||||
Sbjct: 648 gactccaagga 658
>gnl|LJGI|TC65006 weakly similar to UniRef100_A7NZD5 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (71%)
Length = 2196
Score = 133 bits (67), Expect = 3e-30
Identities = 160/191 (83%)
Strand = Plus / Plus
Query: 142 agaagccccaaagtcattgagcgaaaatcaccaagaagtcttgtcccagagaggaaacgc 201
|||||||||||| ||| ||| |||| |||||||||||| | || || |||||||| |||
Sbjct: 364 agaagccccaaaatcactgaccgaagatcaccaagaagcccagttcctgagaggaagcgc 423
Query: 202 cctagcagaatatctgaattggaatctcagatttctcaactgaaaggggatttgaagaag 261
|| || ||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||
Sbjct: 424 cccagtagaatatctgaattggaatctcaaatttctcaacttcaagatgatctgaagaag 483
Query: 262 gtgaaggaccagctcaatttttctgagttgtccaagaagcaagctcagcaagatgctaag 321
|||| ||||||||| | | | |||| | | ||||||||||||||||||||||||| |
Sbjct: 484 gtgagggaccagcttattctaactgaatcatgcaagaagcaagctcagcaagatgctcaa 543
Query: 322 gagtccaagga 332
|| ||||||||
Sbjct: 544 gactccaagga 554
Score = 115 bits (58), Expect = 8e-25
Identities = 160/194 (82%)
Strand = Plus / Plus
Query: 946 gaagaacagattcagaacatagtgaagatgaagaatgctcatgagtcgatcgagcggata 1005
||||||||||||| || || |||| |||| | |||||| |||||| ||| |||| ||||
Sbjct: 1249 gaagaacagattcggagcacagtgcagatcaggaatgcctatgagttgatggagcagata 1308
Query: 1006 aaatcagaatcaagtcagaaagtgtctgagctagaggctgagctgaagagaaatgaagct 1065
||||| ||||| |||| || | | |||| | |||||||| |||| ||||| |||||
Sbjct: 1309 aaatctgaatcgggtcaaaaggaatgtgagttcgaggctgaattgaaaagaaagaaagct 1368
Query: 1066 gaaaatgaagagttgaaggcaaacctgatggataaggaaaccgagttgcagggtattgtg 1125
|| | ||||||||||||||| ||| | ||||| |||||||||||| ||||||||||| ||
Sbjct: 1369 gatattgaagagttgaaggctaacttaatggacaaggaaaccgagctgcagggtattatg 1428
Query: 1126 gaggagaatgagaa 1139
||||||||||||||
Sbjct: 1429 gaggagaatgagaa 1442
Score = 63.9 bits (32), Expect = 3e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1406 tgagaaggctgagggtgcaatctgatcaatggaggaaggctgcagaagcggctgctgcta 1465
|||||||| ||| |||||| ||||||||||||||||| |||||||| || ||||| ||||
Sbjct: 1775 tgagaaggatgaaggtgcagtctgatcaatggaggaaagctgcagaggctgctgccgcta 1834
Score = 60.0 bits (30), Expect = 4e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 503 cagaggtggaactactaaacttgaagcataacttggcagaatctctttctcttgtgaaga 562
|||| ||||| || |||||| ||||||| |||||| ||||| ||||||||||||| |||
Sbjct: 824 cagatgtggagctgctaaacctgaagcaaaacttgtcagaaactctttctcttgttgaga 883
Query: 563 acatga 568
||||||
Sbjct: 884 acatga 889
>gnl|LJGI|TC65643 similar to UniRef100_A7NZD5 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (18%)
Length = 633
Score = 63.9 bits (32), Expect = 3e-09
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 1406 tgagaaggctgagggtgcaatctgatcaatggaggaaggctgcagaagcggctgctgcta 1465
|||||||| ||| |||||| ||||||||||||||||| |||||||| || ||||| ||||
Sbjct: 194 tgagaaggatgaaggtgcagtctgatcaatggaggaaagctgcagaggctgctgccgcta 253