Miyakogusa Predicted Gene

Lj0g3v0317149.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0317149.1 tr|I4GA32|I4GA32_MICAE Cupin 4 family protein
OS=Microcystis aeruginosa PCC 9443 GN=MICAC_5980006
PE,41.98,0.000000002,seg,NULL; Clavaminate synthase-like,NULL;
Cupin_4,JmjC domain,CUFF.21458.1
         (1047 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV416064 similar to UniRef100_A7Q6A9 Cluster: Chromosom...   686   0.0  
gnl|LJGI|AV766676 similar to UniRef100_A7Q6A9 Cluster: Chromosom...   208   5e-53

>gnl|LJGI|AV416064 similar to UniRef100_A7Q6A9 Cluster: Chromosome chr11 scaffold_56,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_56, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 418

 Score =  686 bits (346), Expect = 0.0
 Identities = 394/410 (96%)
 Strand = Plus / Plus

                                                                       
Query: 436 ttgccatttgaagttgtccagggaggtctttttgggagtgattttgaagattttatgtca 495
           ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 9   ttgccatttgaagttgttcagagaggtctttttgggagtgattttgaagattttatgtca 68

                                                                       
Query: 496 acttactgggaagtttcaccttttcttctatcaagggaattaaaggatctaaatatgcat 555
           | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 69  aattactgggaagtttcgccttttcttctatcaagggaattaaaggatctaaatatggat 128

                                                                       
Query: 556 gatatgtttagcccatttatacaatctttgaggtggaatgggagcgttccttcccttctt 615
           |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 129 gatatgtttagcccatttatacaatctttggggtggaatgggagtgttccttcccttctt 188

                                                                       
Query: 616 tcttcgatactcaaaggtctagtgtcttgttttcctattgcttcagatgagcaaaacatc 675
           || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 189 tcctcgatactcaaaggtctagtgtcttgttttcctattgcttccgatgagcaaaacatc 248

                                                                       
Query: 676 ctcaatttgttgaatgaggtgaaagatagattgggttgtcctttgatctaccagcaggat 735
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ctcaattttttgaatgaggtgaaagatagattgggttgtcctttgatctaccagcaggat 308

                                                                       
Query: 736 atacgggttgtgaaaacggagagccaaaaaggaaaagagatgcattactttcaggacttc 795
           ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| 
Sbjct: 309 atacgggttgtgaaaacagagagccaaacaggaaaagagatgcattactttcaggacttt 368

                                                             
Query: 796 catcctggctgcactaaggagcctctgtattttactattgatgatgtctt 845
           ||||||||||||||||| |||||||||||||| ||| |||||||||||||
Sbjct: 369 catcctggctgcactaaagagcctctgtatttgactgttgatgatgtctt 418


>gnl|LJGI|AV766676 similar to UniRef100_A7Q6A9 Cluster: Chromosome chr11 scaffold_56,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_56, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 544

 Score =  208 bits (105), Expect = 5e-53
 Identities = 108/109 (99%)
 Strand = Plus / Minus

                                                                        
Query: 936  attagcacttatgtttggccaaccttcagtaggtgccaatttgtacttaacaccacctaa 995
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 544  attagcacttatgtttggccaaccttcagtaggtgccaattggtacttaacaccacctaa 485

                                                             
Query: 996  ttctcagggtctggcttgtcactttgatgatcactgtgtacttgtgtgc 1044
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484  ttctcagggtctggcttgtcactttgatgatcactgtgtacttgtgtgc 436