Miyakogusa Predicted Gene

Lj0g3v0317109.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0317109.1 Non Chatacterized Hit- tr|I1NH04|I1NH04_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41913
PE,72.73,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
ABC_membrane,ABC transporter, transmembrane domain;,CUFF.21447.1
         (4092 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Ch...   327   3e-88
gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosom...   198   2e-49
gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromoso...    84   8e-15

>gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (5%)
          Length = 557

 Score =  327 bits (165), Expect = 3e-88
 Identities = 198/209 (94%)
 Strand = Plus / Plus

                                                                        
Query: 2461 ttgatgtcagatggaaaatccctacaagctgctccttatcacaatctattgacctcaagc 2520
            |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 345  ttgatgtcaggtggaaaatccctacaagctgctccttatcaccatctattgacctcaagc 404

                                                                        
Query: 2521 caagaattccaggacctagtcaatgctcacaaagagactgctggttctgaccggcttgta 2580
            |||| ||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 405  caaggatttcaggatctagtcaatgctcacaaagaaactgctggttctgaccggcttgta 464

                                                                        
Query: 2581 gacgttacttcttcccagagacattcaaattctggtagagagattatacaatctttcaaa 2640
            || ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||
Sbjct: 465  gatgttacttcttcccagagaccttcaaattctggtagagagattataaaatcttccaaa 524

                                         
Query: 2641 caggagcagtttaaagcattaaatggtga 2669
            ||| |||||||||||||||||||||||||
Sbjct: 525  cagaagcagtttaaagcattaaatggtga 553


>gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (5%)
          Length = 209

 Score =  198 bits (100), Expect = 2e-49
 Identities = 155/174 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2205 gtttccccatggtgacctcactgaaataggcgagagaggagttaacctaagtggaggtca 2264
            |||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 3    gtttccccatggtgacctcactgaaataggtgaaagaggagtaaacctcagtggaggaca 62

                                                                        
Query: 2265 gaagcagcgaattcaactagcccgtgctctttatcagaatgctgatgtatatctcctgga 2324
             ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||  ||||
Sbjct: 63   aaagcagcgagttcaactcgcccgtgctctttatcaaaatgctgatgtatatcttttgga 122

                                                                  
Query: 2325 tgatccattcagtgctgttgatgctcacacagccacaaatttgatcaatgaata 2378
            ||||||| ||| |||||||||||| || || ||  |||||||| ||||||||||
Sbjct: 123  tgatccantcantgctgttgatgcgcatactgcttcaaatttgttcaatgaata 176


>gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (10%)
          Length = 688

 Score = 83.8 bits (42), Expect = 8e-15
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                  
Query: 3998 tatctcaacactctgatcaagaaatatgggaggttcttggcaagtgtcagttgc 4051
            ||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 1    tatctcaacactctgatcaagaaatatgggaggttctgggaaagtgtcaattgc 54