Miyakogusa Predicted Gene
- Lj0g3v0317039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0317039.1 Non Chatacterized Hit- tr|Q55EP8|Q55EP8_DICDI
Putative uncharacterized protein OS=Dictyostelium
disc,36,4e-19,YbaK,YbaK/aminoacyl-tRNA synthetase-associated domain;
YbaK/ProRS associated domain,YbaK/aminoacyl-t,CUFF.21441.1
(681 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63169 similar to UniRef100_A7QY95 Cluster: Chromosome... 1350 0.0
gnl|LJGI|TC63822 similar to UniRef100_A7QY95 Cluster: Chromosome... 1072 0.0
gnl|LJGI|DC597617 similar to UniRef100_A7QY95 Cluster: Chromosom... 720 0.0
gnl|LJGI|BP081853 similar to UniRef100_A7QY95 Cluster: Chromosom... 462 e-129
gnl|LJGI|TC75370 similar to UniRef100_A7QY95 Cluster: Chromosome... 462 e-129
>gnl|LJGI|TC63169 similar to UniRef100_A7QY95 Cluster: Chromosome chr2 scaffold_241,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_241, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1032
Score = 1350 bits (681), Expect = 0.0
Identities = 681/681 (100%)
Strand = Plus / Plus
Query: 1 atgaaaacggaagaagccatggctgagttggagcgagtccaaacccacctcctccaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atgaaaacggaagaagccatggctgagttggagcgagtccaaacccacctcctccaacgc 162
Query: 61 atctcaaagctcgagcattctcttctcaccgacgaccctaacactcacactgacactaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 atctcaaagctcgagcattctcttctcaccgacgaccctaacactcacactgacactaac 222
Query: 121 actgacgacaccgtcgctcgcctttcttccattctgcgcaccaacggcgtcgacgacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 actgacgacaccgtcgctcgcctttcttccattctgcgcaccaacggcgtcgacgacttc 282
Query: 181 tccttcaagagggtcccatccgactactacgattcgccgctcgaagtccgccgcgatgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tccttcaagagggtcccatccgactactacgattcgccgctcgaagtccgccgcgatgcc 342
Query: 241 ctcgccgccgcctccattcaccacctctgcaagagcatcgttctggtcaacacgcaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctcgccgccgcctccattcaccacctctgcaagagcatcgttctggtcaacacgcaagcc 402
Query: 301 ccatcaaacgttgttgattgcagcgatcggaaaaattcaaagtactatgttgttattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccatcaaacgttgttgattgcagcgatcggaaaaattcaaagtactatgttgttattgtt 462
Query: 361 cagtacactgctcggttcaatgctgaggctgtgaagagctttctgttctcgctcaacaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cagtacactgctcggttcaatgctgaggctgtgaagagctttctgttctcgctcaacaat 522
Query: 421 ggaagtatagccaagaagaaattcaatttgaggctagctcctgaggagacatcaacggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggaagtatagccaagaagaaattcaatttgaggctagctcctgaggagacatcaacggag 582
Query: 481 ttaactggatttgggcacaatgcagtgacttgtgtcggcatgaaaacagacattccggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttaactggatttgggcacaatgcagtgacttgtgtcggcatgaaaacagacattccggtg 642
Query: 541 attctggatgaagctattgtaaaactaactccagatttcttttggttgggtggcggtgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 attctggatgaagctattgtaaaactaactccagatttcttttggttgggtggcggtgag 702
Query: 601 gttgatctgaagctagggatccgaacatctcaattaatcagatttatcaacccattcatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gttgatctgaagctagggatccgaacatctcaattaatcagatttatcaacccattcatc 762
Query: 661 gtcaattgtagcagtggttga 681
|||||||||||||||||||||
Sbjct: 763 gtcaattgtagcagtggttga 783
>gnl|LJGI|TC63822 similar to UniRef100_A7QY95 Cluster: Chromosome chr2 scaffold_241,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_241, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 657
Score = 1072 bits (541), Expect = 0.0
Identities = 593/616 (96%), Gaps = 22/616 (3%)
Strand = Plus / Plus
Query: 1 atgaaaacggaagaagccatggctgagttggagcgagtccaaacccacctcctccaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgaaaacggaagaagccatggctgagttggagcgagtccaaacccacctcctccaacgc 123
Query: 61 atctcaaagctcgagcattctcttctcaccgacgaccctaacactcacactgacactaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atctcaaagctcgagcattctcttctcaccgacgaccctaacactcacactgacactaac 183
Query: 121 actgacgacaccgtcgctcgcctttcttccattctgcgcaccaacggcgtcgacgacttc 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 actggcgacaccgtcgctcgcctttcttccattctgcgcaccaacggcgtcgacgacttc 243
Query: 181 tccttcaagagggtcccatccgactactacgattcgccgctcgaagtccgccgcgatgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tccttcaagagggtcccatccgactactacgattcgccgctcgaagtccgccgcgatgcc 303
Query: 241 ctcgccgccgcctccattcaccacctctgcaagagcatcgttctggtcaacacgcaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctcgccgccgcctccattcaccacctctgcaagagcatcgttctggtcaacacgcaagcc 363
Query: 301 ccatcaaacgttgttgattgcagcgatcggaaaaattcaaagtactatgttgttattgtt 360
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ccatcaaacgttgttgattgcagcgatcggaaaaattcaaa------------------- 404
Query: 361 cagtacactgctcggttcaatgctgaggctgtgaagagctttctgttctcgctcaacaat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ---tacactgctcggttcaatgctgaggctgtgaagagctttctgttctcgctcaacaat 461
Query: 421 ggaagtatagccaagaagaaattcaatttgaggctagctcctgaggagacatcaacggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggaagtatagccaagaagaaattcaatttgaggctagctcctgaggagacatcaacggag 521
Query: 481 ttaactggatttgggcacaatgcagtgacttgtgtcggcatgaaaacagacattccggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttaactggatttgggcacaatgcagtgacttgtgtcggcatgaaaacagacattccggtg 581
Query: 541 attctggatgaagctattgtaaaactaactccagatttcttttggttgggtggcggtgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 attctggatgaagctattgtaaaactaactccagatttcttttggttgggtggcggtgag 641
Query: 601 gttgatctgaagctag 616
||||||||||||||||
Sbjct: 642 gttgatctgaagctag 657
>gnl|LJGI|DC597617 similar to UniRef100_A7QY95 Cluster: Chromosome chr2 scaffold_241,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_241, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 555
Score = 720 bits (363), Expect = 0.0
Identities = 363/363 (100%)
Strand = Plus / Plus
Query: 1 atgaaaacggaagaagccatggctgagttggagcgagtccaaacccacctcctccaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 atgaaaacggaagaagccatggctgagttggagcgagtccaaacccacctcctccaacgc 125
Query: 61 atctcaaagctcgagcattctcttctcaccgacgaccctaacactcacactgacactaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atctcaaagctcgagcattctcttctcaccgacgaccctaacactcacactgacactaac 185
Query: 121 actgacgacaccgtcgctcgcctttcttccattctgcgcaccaacggcgtcgacgacttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 actgacgacaccgtcgctcgcctttcttccattctgcgcaccaacggcgtcgacgacttc 245
Query: 181 tccttcaagagggtcccatccgactactacgattcgccgctcgaagtccgccgcgatgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tccttcaagagggtcccatccgactactacgattcgccgctcgaagtccgccgcgatgcc 305
Query: 241 ctcgccgccgcctccattcaccacctctgcaagagcatcgttctggtcaacacgcaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctcgccgccgcctccattcaccacctctgcaagagcatcgttctggtcaacacgcaagcc 365
Query: 301 ccatcaaacgttgttgattgcagcgatcggaaaaattcaaagtactatgttgttattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ccatcaaacgttgttgattgcagcgatcggaaaaattcaaagtactatgttgttattgtt 425
Query: 361 cag 363
|||
Sbjct: 426 cag 428
Score = 81.8 bits (41), Expect = 5e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 361 cagtacactgctcggttcaatgctgaggctgtgaagagctt 401
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cagtacactgctcggttcaatgctgaggctgtgaagagctt 555
>gnl|LJGI|BP081853 similar to UniRef100_A7QY95 Cluster: Chromosome chr2 scaffold_241,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_241, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 506
Score = 462 bits (233), Expect = e-129
Identities = 233/233 (100%)
Strand = Plus / Minus
Query: 449 tgaggctagctcctgaggagacatcaacggagttaactggatttgggcacaatgcagtga 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tgaggctagctcctgaggagacatcaacggagttaactggatttgggcacaatgcagtga 408
Query: 509 cttgtgtcggcatgaaaacagacattccggtgattctggatgaagctattgtaaaactaa 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cttgtgtcggcatgaaaacagacattccggtgattctggatgaagctattgtaaaactaa 348
Query: 569 ctccagatttcttttggttgggtggcggtgaggttgatctgaagctagggatccgaacat 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ctccagatttcttttggttgggtggcggtgaggttgatctgaagctagggatccgaacat 288
Query: 629 ctcaattaatcagatttatcaacccattcatcgtcaattgtagcagtggttga 681
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ctcaattaatcagatttatcaacccattcatcgtcaattgtagcagtggttga 235
>gnl|LJGI|TC75370 similar to UniRef100_A7QY95 Cluster: Chromosome chr2 scaffold_241,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_241, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 592
Score = 462 bits (233), Expect = e-129
Identities = 233/233 (100%)
Strand = Plus / Plus
Query: 449 tgaggctagctcctgaggagacatcaacggagttaactggatttgggcacaatgcagtga 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 tgaggctagctcctgaggagacatcaacggagttaactggatttgggcacaatgcagtga 158
Query: 509 cttgtgtcggcatgaaaacagacattccggtgattctggatgaagctattgtaaaactaa 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cttgtgtcggcatgaaaacagacattccggtgattctggatgaagctattgtaaaactaa 218
Query: 569 ctccagatttcttttggttgggtggcggtgaggttgatctgaagctagggatccgaacat 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ctccagatttcttttggttgggtggcggtgaggttgatctgaagctagggatccgaacat 278
Query: 629 ctcaattaatcagatttatcaacccattcatcgtcaattgtagcagtggttga 681
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctcaattaatcagatttatcaacccattcatcgtcaattgtagcagtggttga 331